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Unsupervised learning for large-scale corneal topography clustering

Machine learning algorithms have recently shown their precision and potential in many different use cases and fields of medicine. Most of the algorithms used are supervised and need a large quantity of labeled data to achieve high accuracy. Also, most applications of machine learning in medicine are...

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Autores principales: Zéboulon, Pierre, Debellemanière, Guillaume, Gatinel, Damien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7550569/
https://www.ncbi.nlm.nih.gov/pubmed/33046810
http://dx.doi.org/10.1038/s41598-020-73902-7
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author Zéboulon, Pierre
Debellemanière, Guillaume
Gatinel, Damien
author_facet Zéboulon, Pierre
Debellemanière, Guillaume
Gatinel, Damien
author_sort Zéboulon, Pierre
collection PubMed
description Machine learning algorithms have recently shown their precision and potential in many different use cases and fields of medicine. Most of the algorithms used are supervised and need a large quantity of labeled data to achieve high accuracy. Also, most applications of machine learning in medicine are attempts to mimic or exceed human diagnostic capabilities but little work has been done to show the power of these algorithms to help collect and pre-process a large amount of data. In this study we show how unsupervised learning can extract and sort usable data from large unlabeled datasets with minimal human intervention. Our digital examination tools used in clinical practice store such databases and are largely under-exploited. We applied unsupervised algorithms to corneal topography examinations which remains the gold standard test for diagnosis and follow-up of many corneal diseases and refractive surgery screening. We could extract 7019 usable examinations which were automatically sorted in 3 common diagnoses (Normal, Keratoconus and History of Refractive Surgery) from an unlabeled database with an overall accuracy of 96.5%. Similar methods could be used on any form of digital examination database and greatly speed up the data collection process and yield to the elaboration of stronger supervised models.
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spelling pubmed-75505692020-10-14 Unsupervised learning for large-scale corneal topography clustering Zéboulon, Pierre Debellemanière, Guillaume Gatinel, Damien Sci Rep Article Machine learning algorithms have recently shown their precision and potential in many different use cases and fields of medicine. Most of the algorithms used are supervised and need a large quantity of labeled data to achieve high accuracy. Also, most applications of machine learning in medicine are attempts to mimic or exceed human diagnostic capabilities but little work has been done to show the power of these algorithms to help collect and pre-process a large amount of data. In this study we show how unsupervised learning can extract and sort usable data from large unlabeled datasets with minimal human intervention. Our digital examination tools used in clinical practice store such databases and are largely under-exploited. We applied unsupervised algorithms to corneal topography examinations which remains the gold standard test for diagnosis and follow-up of many corneal diseases and refractive surgery screening. We could extract 7019 usable examinations which were automatically sorted in 3 common diagnoses (Normal, Keratoconus and History of Refractive Surgery) from an unlabeled database with an overall accuracy of 96.5%. Similar methods could be used on any form of digital examination database and greatly speed up the data collection process and yield to the elaboration of stronger supervised models. Nature Publishing Group UK 2020-10-12 /pmc/articles/PMC7550569/ /pubmed/33046810 http://dx.doi.org/10.1038/s41598-020-73902-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zéboulon, Pierre
Debellemanière, Guillaume
Gatinel, Damien
Unsupervised learning for large-scale corneal topography clustering
title Unsupervised learning for large-scale corneal topography clustering
title_full Unsupervised learning for large-scale corneal topography clustering
title_fullStr Unsupervised learning for large-scale corneal topography clustering
title_full_unstemmed Unsupervised learning for large-scale corneal topography clustering
title_short Unsupervised learning for large-scale corneal topography clustering
title_sort unsupervised learning for large-scale corneal topography clustering
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7550569/
https://www.ncbi.nlm.nih.gov/pubmed/33046810
http://dx.doi.org/10.1038/s41598-020-73902-7
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