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Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children

A Gram-positive, α-hemolytic, catalase-negative, facultative anaerobic and non-motile coccus was isolated form throat swabs taken from the oropharynx of healthy children. The genome was shown to be 1.950,659 bp long and contained 42.03 mol% G + C bases with 1,942 protein-coding and 53 RNA coding gen...

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Autores principales: Zou, Yang, Sun, Ye, Qi, He, Liu, Defeng, Tian, Han, Wang, Nan, Li, Xinming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7550633/
https://www.ncbi.nlm.nih.gov/pubmed/33133039
http://dx.doi.org/10.3389/fmicb.2020.563213
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author Zou, Yang
Sun, Ye
Qi, He
Liu, Defeng
Tian, Han
Wang, Nan
Li, Xinming
author_facet Zou, Yang
Sun, Ye
Qi, He
Liu, Defeng
Tian, Han
Wang, Nan
Li, Xinming
author_sort Zou, Yang
collection PubMed
description A Gram-positive, α-hemolytic, catalase-negative, facultative anaerobic and non-motile coccus was isolated form throat swabs taken from the oropharynx of healthy children. The genome was shown to be 1.950,659 bp long and contained 42.03 mol% G + C bases with 1,942 protein-coding and 53 RNA coding genes. The results of 16S rRNA gene sequencing strongly suggested that the strain is a member of the Streptococcus genus, with 98.04, 98.11, and 97.34% similarities to Streptococcus australis ATCC 700641(T), Streptococcus rubneri LMG 27207(T) and Streptococcus parasanguinis ATCC 15912(T), respectively. A sodA gene comparison exhibited a sequence identity of 92.6% with the closest strain Streptococcus australis ATCC 700641(T). In silico DNA-DNA hybridization showed a highest DNA similarity value of 52% with Streptococcus australis ATCC 700641(T). Comparing 18 biochemical traits, the similarities of the Streptococcus strain E24 were 72% with Streptococcus rubneri LMG 27207(T), 78% with Streptococcus australis ATCC 700641(T) and 44% with Streptococcus parasanguinis ATCC 15912(T). We suggest that based on the genotypic and phenotypic results that the strain E24 is a novel species of the Streptococcus genus and propose the name Streptococcus xiaochunlingii sp. nov. E24.
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spelling pubmed-75506332020-10-29 Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children Zou, Yang Sun, Ye Qi, He Liu, Defeng Tian, Han Wang, Nan Li, Xinming Front Microbiol Microbiology A Gram-positive, α-hemolytic, catalase-negative, facultative anaerobic and non-motile coccus was isolated form throat swabs taken from the oropharynx of healthy children. The genome was shown to be 1.950,659 bp long and contained 42.03 mol% G + C bases with 1,942 protein-coding and 53 RNA coding genes. The results of 16S rRNA gene sequencing strongly suggested that the strain is a member of the Streptococcus genus, with 98.04, 98.11, and 97.34% similarities to Streptococcus australis ATCC 700641(T), Streptococcus rubneri LMG 27207(T) and Streptococcus parasanguinis ATCC 15912(T), respectively. A sodA gene comparison exhibited a sequence identity of 92.6% with the closest strain Streptococcus australis ATCC 700641(T). In silico DNA-DNA hybridization showed a highest DNA similarity value of 52% with Streptococcus australis ATCC 700641(T). Comparing 18 biochemical traits, the similarities of the Streptococcus strain E24 were 72% with Streptococcus rubneri LMG 27207(T), 78% with Streptococcus australis ATCC 700641(T) and 44% with Streptococcus parasanguinis ATCC 15912(T). We suggest that based on the genotypic and phenotypic results that the strain E24 is a novel species of the Streptococcus genus and propose the name Streptococcus xiaochunlingii sp. nov. E24. Frontiers Media S.A. 2020-09-29 /pmc/articles/PMC7550633/ /pubmed/33133039 http://dx.doi.org/10.3389/fmicb.2020.563213 Text en Copyright © 2020 Zou, Sun, Qi, Liu, Tian, Wang and Li. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Zou, Yang
Sun, Ye
Qi, He
Liu, Defeng
Tian, Han
Wang, Nan
Li, Xinming
Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children
title Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children
title_full Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children
title_fullStr Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children
title_full_unstemmed Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children
title_short Streptococcus xiaochunlingii sp. nov. E24 Isolated From the Oropharynx of Healthy Chinese Children
title_sort streptococcus xiaochunlingii sp. nov. e24 isolated from the oropharynx of healthy chinese children
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7550633/
https://www.ncbi.nlm.nih.gov/pubmed/33133039
http://dx.doi.org/10.3389/fmicb.2020.563213
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