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The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales
Novel posa-like viral genomes were first identified in swine fecal samples using metagenomics and were designated as unclassified viruses in the order Picornavirales. In the present study, nine husavirus strains were identified in China. Their genomes share 94.1–99.9% similarity, and alignment of th...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7551994/ https://www.ncbi.nlm.nih.gov/pubmed/32906743 http://dx.doi.org/10.3390/v12090995 |
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author | Han, Zhenzhi Xiao, Jinbo Song, Yang Hong, Mei Dai, Guolong Lu, Huanhuan Zhang, Man Liang, Yueling Yan, Dongmei Zhu, Shuangli Xu, Wenbo Zhang, Yong |
author_facet | Han, Zhenzhi Xiao, Jinbo Song, Yang Hong, Mei Dai, Guolong Lu, Huanhuan Zhang, Man Liang, Yueling Yan, Dongmei Zhu, Shuangli Xu, Wenbo Zhang, Yong |
author_sort | Han, Zhenzhi |
collection | PubMed |
description | Novel posa-like viral genomes were first identified in swine fecal samples using metagenomics and were designated as unclassified viruses in the order Picornavirales. In the present study, nine husavirus strains were identified in China. Their genomes share 94.1–99.9% similarity, and alignment of these nine husavirus strains identified 697 nucleotide polymorphism sites across their full-length genomes. These nine strains were directly clustered with the Husavirus 1 lineage, and their genomic arrangement showed similar characteristics. These posa-like viruses have undergone a complex evolutionary process, and have a wide geographic distribution, complex host spectrum, deep phylogenetic divergence, and diverse genomic organizations. The clade of posa-like viruses forms a single group, which is evolutionarily distinct from other known families and could represent a distinct family within the Picornavirales. The genomic arrangement of Picornavirales and the new posa-like viruses are different, whereas the posa-like viruses have genomic modules similar to the families Dicistroviridae and Marnaviridae. The present study provides valuable genetic evidence of husaviruses in China, and clarifies the phylogenetic dynamics and the evolutionary characteristics of Picornavirales. |
format | Online Article Text |
id | pubmed-7551994 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75519942020-10-14 The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales Han, Zhenzhi Xiao, Jinbo Song, Yang Hong, Mei Dai, Guolong Lu, Huanhuan Zhang, Man Liang, Yueling Yan, Dongmei Zhu, Shuangli Xu, Wenbo Zhang, Yong Viruses Article Novel posa-like viral genomes were first identified in swine fecal samples using metagenomics and were designated as unclassified viruses in the order Picornavirales. In the present study, nine husavirus strains were identified in China. Their genomes share 94.1–99.9% similarity, and alignment of these nine husavirus strains identified 697 nucleotide polymorphism sites across their full-length genomes. These nine strains were directly clustered with the Husavirus 1 lineage, and their genomic arrangement showed similar characteristics. These posa-like viruses have undergone a complex evolutionary process, and have a wide geographic distribution, complex host spectrum, deep phylogenetic divergence, and diverse genomic organizations. The clade of posa-like viruses forms a single group, which is evolutionarily distinct from other known families and could represent a distinct family within the Picornavirales. The genomic arrangement of Picornavirales and the new posa-like viruses are different, whereas the posa-like viruses have genomic modules similar to the families Dicistroviridae and Marnaviridae. The present study provides valuable genetic evidence of husaviruses in China, and clarifies the phylogenetic dynamics and the evolutionary characteristics of Picornavirales. MDPI 2020-09-07 /pmc/articles/PMC7551994/ /pubmed/32906743 http://dx.doi.org/10.3390/v12090995 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Han, Zhenzhi Xiao, Jinbo Song, Yang Hong, Mei Dai, Guolong Lu, Huanhuan Zhang, Man Liang, Yueling Yan, Dongmei Zhu, Shuangli Xu, Wenbo Zhang, Yong The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales |
title | The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales |
title_full | The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales |
title_fullStr | The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales |
title_full_unstemmed | The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales |
title_short | The Husavirus Posa-Like Viruses in China, and a New Group of Picornavirales |
title_sort | husavirus posa-like viruses in china, and a new group of picornavirales |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7551994/ https://www.ncbi.nlm.nih.gov/pubmed/32906743 http://dx.doi.org/10.3390/v12090995 |
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