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Diagnostic utility of genetic testing in patients undergoing renal biopsy

High-throughput DNA testing is becoming established as a standard diagnostic test in the renal clinic. Previously published studies on cohorts of patients with unexplained chronic kidney disease of a suspected genetic aetiology have suggested a diagnostic yield for genomic sequencing of up to 18%. H...

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Autores principales: Benson, Katherine A., Murray, Susan L., Doyle, Ross, Doyle, Brendan, Dorman, Anthony M., Sadlier, Denise, Brennan, Eoin, Large, Margaret, Cavalleri, Gianpiero L., Godson, Catherine, Conlon, Peter J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7552929/
https://www.ncbi.nlm.nih.gov/pubmed/32723786
http://dx.doi.org/10.1101/mcs.a005462
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author Benson, Katherine A.
Murray, Susan L.
Doyle, Ross
Doyle, Brendan
Dorman, Anthony M.
Sadlier, Denise
Brennan, Eoin
Large, Margaret
Cavalleri, Gianpiero L.
Godson, Catherine
Conlon, Peter J.
author_facet Benson, Katherine A.
Murray, Susan L.
Doyle, Ross
Doyle, Brendan
Dorman, Anthony M.
Sadlier, Denise
Brennan, Eoin
Large, Margaret
Cavalleri, Gianpiero L.
Godson, Catherine
Conlon, Peter J.
author_sort Benson, Katherine A.
collection PubMed
description High-throughput DNA testing is becoming established as a standard diagnostic test in the renal clinic. Previously published studies on cohorts of patients with unexplained chronic kidney disease of a suspected genetic aetiology have suggested a diagnostic yield for genomic sequencing of up to 18%. Here we determine the yield of targeted gene panel in a clinically unscreened cohort of patients referred for percutaneous native renal biopsy. Patients who underwent renal biopsy for investigation of chronic kidney disease were sequenced using a genomic sequencing panel covering 227 genes in which variation is known to be associated with monogenic chronic kidney disease (CKD). Candidate disease-causing variants were assessed for pathogenicity using guidelines from the American College for Medical Genetics and Genomics. Fifty CKD patients were recruited and sequenced. A molecular diagnosis was obtained for two patients (4%). A molecular diagnosis is possible using genomic testing in ∼4% of clinically unscreened patients undergoing renal biopsy. Genetic screening may be useful for diagnosis in a subset of CKD patients but is most valuable when applied to patients with suspected heritable forms of kidney disease.
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spelling pubmed-75529292020-10-20 Diagnostic utility of genetic testing in patients undergoing renal biopsy Benson, Katherine A. Murray, Susan L. Doyle, Ross Doyle, Brendan Dorman, Anthony M. Sadlier, Denise Brennan, Eoin Large, Margaret Cavalleri, Gianpiero L. Godson, Catherine Conlon, Peter J. Cold Spring Harb Mol Case Stud Research Report High-throughput DNA testing is becoming established as a standard diagnostic test in the renal clinic. Previously published studies on cohorts of patients with unexplained chronic kidney disease of a suspected genetic aetiology have suggested a diagnostic yield for genomic sequencing of up to 18%. Here we determine the yield of targeted gene panel in a clinically unscreened cohort of patients referred for percutaneous native renal biopsy. Patients who underwent renal biopsy for investigation of chronic kidney disease were sequenced using a genomic sequencing panel covering 227 genes in which variation is known to be associated with monogenic chronic kidney disease (CKD). Candidate disease-causing variants were assessed for pathogenicity using guidelines from the American College for Medical Genetics and Genomics. Fifty CKD patients were recruited and sequenced. A molecular diagnosis was obtained for two patients (4%). A molecular diagnosis is possible using genomic testing in ∼4% of clinically unscreened patients undergoing renal biopsy. Genetic screening may be useful for diagnosis in a subset of CKD patients but is most valuable when applied to patients with suspected heritable forms of kidney disease. Cold Spring Harbor Laboratory Press 2020-10 /pmc/articles/PMC7552929/ /pubmed/32723786 http://dx.doi.org/10.1101/mcs.a005462 Text en © 2020 Benson et al.; Published by Cold Spring Harbor Laboratory Press http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/) , which permits reuse and redistribution, except for commercial purposes, provided that the original author and source are credited.
spellingShingle Research Report
Benson, Katherine A.
Murray, Susan L.
Doyle, Ross
Doyle, Brendan
Dorman, Anthony M.
Sadlier, Denise
Brennan, Eoin
Large, Margaret
Cavalleri, Gianpiero L.
Godson, Catherine
Conlon, Peter J.
Diagnostic utility of genetic testing in patients undergoing renal biopsy
title Diagnostic utility of genetic testing in patients undergoing renal biopsy
title_full Diagnostic utility of genetic testing in patients undergoing renal biopsy
title_fullStr Diagnostic utility of genetic testing in patients undergoing renal biopsy
title_full_unstemmed Diagnostic utility of genetic testing in patients undergoing renal biopsy
title_short Diagnostic utility of genetic testing in patients undergoing renal biopsy
title_sort diagnostic utility of genetic testing in patients undergoing renal biopsy
topic Research Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7552929/
https://www.ncbi.nlm.nih.gov/pubmed/32723786
http://dx.doi.org/10.1101/mcs.a005462
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