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Batch-Corrected Distance Mitigates Temporal and Spatial Variability for Clustering and Visualization of Single-Cell Gene Expression Data

Clustering and visualization are essential parts of single-cell gene expression data analysis. The Euclidean distance used in most distance-based methods is not optimal. Batch effect, i.e., the variability among samples gathered from different times, tissues, and patients, introduces large between-g...

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Detalles Bibliográficos
Autores principales: Liang, Shaoheng, Dou, Jinzhuang, Iqbal, Ramiz, Chen, Ken
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7553164/
https://www.ncbi.nlm.nih.gov/pubmed/33052339
http://dx.doi.org/10.1101/2020.10.08.332080