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Identification of the SUT Gene Family in Pomegranate (Punica granatum L.) and Functional Analysis of PgL0145810.1
Sucrose, an important sugar, is transported from source to sink tissues through the phloem, and plays important role in the development of important traits in plants. However, the SUT gene family is still not well characterized in pomegranate. In this study, we first identified the pomegranate sucro...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7554910/ https://www.ncbi.nlm.nih.gov/pubmed/32927615 http://dx.doi.org/10.3390/ijms21186608 |
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author | Poudel, Krishna Luo, Xiang Chen, Lina Jing, Dan Xia, Xiaocong Tang, Liying Li, Haoxian Cao, Shangyin |
author_facet | Poudel, Krishna Luo, Xiang Chen, Lina Jing, Dan Xia, Xiaocong Tang, Liying Li, Haoxian Cao, Shangyin |
author_sort | Poudel, Krishna |
collection | PubMed |
description | Sucrose, an important sugar, is transported from source to sink tissues through the phloem, and plays important role in the development of important traits in plants. However, the SUT gene family is still not well characterized in pomegranate. In this study, we first identified the pomegranate sucrose transporter (SUT) gene family from the whole genome. Then, the phylogenetic relationship of SUT genes, gene structure and their promoters were analyzed. Additionally, their expression patterns were detected during the development of the seed. Lastly, genetic transformation and cytological observation were used to study the function of PgL0145810.1. A total of ten pomegranate SUT genes were identified from the whole genome of pomegranate ‘Tunisia’. The promoter region of all the pomegranate SUT genes contained myeloblastosis (MYB) elements. Four of the SUT genes, PgL0328370.1, PgL0099690.1, PgL0145810.1 and PgL0145770.1, were differentially expressed during seed development. We further noticed that PgL0145810.1 was expressed most prominently in the stem parts in transgenic plants compared to other tissue parts (leaves, flowers and silique). The cells in the xylem vessels were small and lignin content was lower in the transgenic plants as compared to wild Arabidopsis plants. In general, our result suggests that the MYB cis-elements in the promoter region might regulate PgL0145810.1 expression to control the structure of xylem, thereby affecting seed hardness in pomegranate. |
format | Online Article Text |
id | pubmed-7554910 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75549102020-10-14 Identification of the SUT Gene Family in Pomegranate (Punica granatum L.) and Functional Analysis of PgL0145810.1 Poudel, Krishna Luo, Xiang Chen, Lina Jing, Dan Xia, Xiaocong Tang, Liying Li, Haoxian Cao, Shangyin Int J Mol Sci Article Sucrose, an important sugar, is transported from source to sink tissues through the phloem, and plays important role in the development of important traits in plants. However, the SUT gene family is still not well characterized in pomegranate. In this study, we first identified the pomegranate sucrose transporter (SUT) gene family from the whole genome. Then, the phylogenetic relationship of SUT genes, gene structure and their promoters were analyzed. Additionally, their expression patterns were detected during the development of the seed. Lastly, genetic transformation and cytological observation were used to study the function of PgL0145810.1. A total of ten pomegranate SUT genes were identified from the whole genome of pomegranate ‘Tunisia’. The promoter region of all the pomegranate SUT genes contained myeloblastosis (MYB) elements. Four of the SUT genes, PgL0328370.1, PgL0099690.1, PgL0145810.1 and PgL0145770.1, were differentially expressed during seed development. We further noticed that PgL0145810.1 was expressed most prominently in the stem parts in transgenic plants compared to other tissue parts (leaves, flowers and silique). The cells in the xylem vessels were small and lignin content was lower in the transgenic plants as compared to wild Arabidopsis plants. In general, our result suggests that the MYB cis-elements in the promoter region might regulate PgL0145810.1 expression to control the structure of xylem, thereby affecting seed hardness in pomegranate. MDPI 2020-09-10 /pmc/articles/PMC7554910/ /pubmed/32927615 http://dx.doi.org/10.3390/ijms21186608 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Poudel, Krishna Luo, Xiang Chen, Lina Jing, Dan Xia, Xiaocong Tang, Liying Li, Haoxian Cao, Shangyin Identification of the SUT Gene Family in Pomegranate (Punica granatum L.) and Functional Analysis of PgL0145810.1 |
title | Identification of the SUT Gene Family in Pomegranate (Punica
granatum L.) and Functional Analysis of PgL0145810.1 |
title_full | Identification of the SUT Gene Family in Pomegranate (Punica
granatum L.) and Functional Analysis of PgL0145810.1 |
title_fullStr | Identification of the SUT Gene Family in Pomegranate (Punica
granatum L.) and Functional Analysis of PgL0145810.1 |
title_full_unstemmed | Identification of the SUT Gene Family in Pomegranate (Punica
granatum L.) and Functional Analysis of PgL0145810.1 |
title_short | Identification of the SUT Gene Family in Pomegranate (Punica
granatum L.) and Functional Analysis of PgL0145810.1 |
title_sort | identification of the sut gene family in pomegranate (punica
granatum l.) and functional analysis of pgl0145810.1 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7554910/ https://www.ncbi.nlm.nih.gov/pubmed/32927615 http://dx.doi.org/10.3390/ijms21186608 |
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