Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients

We present manually curated transcriptomics data of psoriasis and atopic dermatitis patients retrieved from the NCBI Gene Expression Omnibus and EBI ArrayExpress repositories. We collected 39 transcriptomics datasets, deriving from DNA microarrays and RNA-Sequencing technologies, for a total of 1677...

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Autores principales: Federico, Antonio, Hautanen, Veera, Christian, Nils, Kremer, Andreas, Serra, Angela, Greco, Dario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Data Descriptor
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7555498/
https://www.ncbi.nlm.nih.gov/pubmed/33051456
http://dx.doi.org/10.1038/s41597-020-00696-8
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author Federico, Antonio
Hautanen, Veera
Christian, Nils
Kremer, Andreas
Serra, Angela
Greco, Dario
author_facet Federico, Antonio
Hautanen, Veera
Christian, Nils
Kremer, Andreas
Serra, Angela
Greco, Dario
author_sort Federico, Antonio
collection PubMed
description We present manually curated transcriptomics data of psoriasis and atopic dermatitis patients retrieved from the NCBI Gene Expression Omnibus and EBI ArrayExpress repositories. We collected 39 transcriptomics datasets, deriving from DNA microarrays and RNA-Sequencing technologies, for a total of 1677 samples. We provide quality-checked, homogenised and preprocessed gene expression matrices and their corresponding metadata tables along with the estimated surrogate variables. These data represent a ready-made valuable source of knowledge for translational researchers in the dermatology field.
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spelling pubmed-75554982020-10-19 Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients Federico, Antonio Hautanen, Veera Christian, Nils Kremer, Andreas Serra, Angela Greco, Dario Sci Data Data Descriptor We present manually curated transcriptomics data of psoriasis and atopic dermatitis patients retrieved from the NCBI Gene Expression Omnibus and EBI ArrayExpress repositories. We collected 39 transcriptomics datasets, deriving from DNA microarrays and RNA-Sequencing technologies, for a total of 1677 samples. We provide quality-checked, homogenised and preprocessed gene expression matrices and their corresponding metadata tables along with the estimated surrogate variables. These data represent a ready-made valuable source of knowledge for translational researchers in the dermatology field. Nature Publishing Group UK 2020-10-13 /pmc/articles/PMC7555498/ /pubmed/33051456 http://dx.doi.org/10.1038/s41597-020-00696-8 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Federico, Antonio
Hautanen, Veera
Christian, Nils
Kremer, Andreas
Serra, Angela
Greco, Dario
Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
title Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
title_full Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
title_fullStr Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
title_full_unstemmed Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
title_short Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
title_sort manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7555498/
https://www.ncbi.nlm.nih.gov/pubmed/33051456
http://dx.doi.org/10.1038/s41597-020-00696-8
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