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Survival prediction of patients with sepsis from age, sex, and septic episode number alone
Sepsis is a life-threatening condition caused by an exaggerated reaction of the body to an infection, that leads to organ failure or even death. Since sepsis can kill a patient even in just one hour, survival prediction is an urgent priority among the medical community: even if laboratory tests and...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7555553/ https://www.ncbi.nlm.nih.gov/pubmed/33051513 http://dx.doi.org/10.1038/s41598-020-73558-3 |
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author | Chicco, Davide Jurman, Giuseppe |
author_facet | Chicco, Davide Jurman, Giuseppe |
author_sort | Chicco, Davide |
collection | PubMed |
description | Sepsis is a life-threatening condition caused by an exaggerated reaction of the body to an infection, that leads to organ failure or even death. Since sepsis can kill a patient even in just one hour, survival prediction is an urgent priority among the medical community: even if laboratory tests and hospital analyses can provide insightful information about the patient, in fact, they might not come in time to allow medical doctors to recognize an immediate death risk and treat it properly. In this context, machine learning can be useful to predict survival of patients within minutes, especially when applied to few medical features easily retrievable. In this study, we show that it is possible to achieve this goal by applying computational intelligence algorithms to three features of patients with sepsis, recorded at hospital admission: sex, age, and septic episode number. We applied several data mining methods to a cohort of 110,204 admissions of patients, and obtained high prediction scores both on this complete dataset (top precision-recall area under the curve PR AUC = 0.966) and on its subset related to the recent Sepsis-3 definition (top PR AUC = 0.860). Additionally, we tested our models on an external validation cohort of 137 patients, and achieved good results in this case too (top PR AUC = 0.863), confirming the generalizability of our approach. Our results can have a huge impact on clinical settings, allowing physicians to forecast the survival of patients by sex, age, and septic episode number alone. |
format | Online Article Text |
id | pubmed-7555553 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-75555532020-10-14 Survival prediction of patients with sepsis from age, sex, and septic episode number alone Chicco, Davide Jurman, Giuseppe Sci Rep Article Sepsis is a life-threatening condition caused by an exaggerated reaction of the body to an infection, that leads to organ failure or even death. Since sepsis can kill a patient even in just one hour, survival prediction is an urgent priority among the medical community: even if laboratory tests and hospital analyses can provide insightful information about the patient, in fact, they might not come in time to allow medical doctors to recognize an immediate death risk and treat it properly. In this context, machine learning can be useful to predict survival of patients within minutes, especially when applied to few medical features easily retrievable. In this study, we show that it is possible to achieve this goal by applying computational intelligence algorithms to three features of patients with sepsis, recorded at hospital admission: sex, age, and septic episode number. We applied several data mining methods to a cohort of 110,204 admissions of patients, and obtained high prediction scores both on this complete dataset (top precision-recall area under the curve PR AUC = 0.966) and on its subset related to the recent Sepsis-3 definition (top PR AUC = 0.860). Additionally, we tested our models on an external validation cohort of 137 patients, and achieved good results in this case too (top PR AUC = 0.863), confirming the generalizability of our approach. Our results can have a huge impact on clinical settings, allowing physicians to forecast the survival of patients by sex, age, and septic episode number alone. Nature Publishing Group UK 2020-10-13 /pmc/articles/PMC7555553/ /pubmed/33051513 http://dx.doi.org/10.1038/s41598-020-73558-3 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Chicco, Davide Jurman, Giuseppe Survival prediction of patients with sepsis from age, sex, and septic episode number alone |
title | Survival prediction of patients with sepsis from age, sex, and septic episode number alone |
title_full | Survival prediction of patients with sepsis from age, sex, and septic episode number alone |
title_fullStr | Survival prediction of patients with sepsis from age, sex, and septic episode number alone |
title_full_unstemmed | Survival prediction of patients with sepsis from age, sex, and septic episode number alone |
title_short | Survival prediction of patients with sepsis from age, sex, and septic episode number alone |
title_sort | survival prediction of patients with sepsis from age, sex, and septic episode number alone |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7555553/ https://www.ncbi.nlm.nih.gov/pubmed/33051513 http://dx.doi.org/10.1038/s41598-020-73558-3 |
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