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Protein anabolism is key to long-term survival in high-grade serous ovarian cancer
This study aimed to identify the biological processes associated with long-term survival in high-grade serous ovarian cancer (HGSOC). HGSOC cases obtained from The Cancer Genome Atlas Ovarian Cancer (TCGA-OV) database were divided into long-term survivors (LTS) and normal-term survivors (NTS) based...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Neoplasia Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7557892/ https://www.ncbi.nlm.nih.gov/pubmed/33045680 http://dx.doi.org/10.1016/j.tranon.2020.100885 |
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author | Wang, Lingxiang Sun, Tao Li, Shumei Zhang, Zhengmao Jia, Jingde Shan, Baoen |
author_facet | Wang, Lingxiang Sun, Tao Li, Shumei Zhang, Zhengmao Jia, Jingde Shan, Baoen |
author_sort | Wang, Lingxiang |
collection | PubMed |
description | This study aimed to identify the biological processes associated with long-term survival in high-grade serous ovarian cancer (HGSOC). HGSOC cases obtained from The Cancer Genome Atlas Ovarian Cancer (TCGA-OV) database were divided into long-term survivors (LTS) and normal-term survivors (NTS) based on survival cutoffs defined by the HGSOC cohort in the SEER database. Differentially expressed genes (DEGs) were screened using the generalized linear modeling (GLM) method. Gene Ontology (GO) functional and KEGG pathway enrichment analyses were performed using DAVID Bioinformatics Resources. DEG-related protein-protein interactions (PPI) were extracted from the STRING database and hub genes were identified using CytoHubba in the Cytoscape program. In total, 157 DEGs, including 155 upregulated and 2 downregulated genes, were identified. Upregulated genes were statistically enriched in 80 GO terms and 11 KEGG pathways related to energy and substrate metabolism, such as protein absorption, digestion, and metabolism as well as signaling pathways, including chromatin silencing, regulation of ERK1 and ERK2 cascade, and regulation of MAPKKK. ALB and POMC were the common hub genes. These findings reveal that protein anabolism is crucial to long-term survival, regulated by activation of the MAPK/ERK signaling pathway and chromatin silencing. Comprehensive understanding of the molecular mechanisms via further exploration may contribute toward an effective treatment for ovarian cancer. |
format | Online Article Text |
id | pubmed-7557892 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Neoplasia Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-75578922020-10-22 Protein anabolism is key to long-term survival in high-grade serous ovarian cancer Wang, Lingxiang Sun, Tao Li, Shumei Zhang, Zhengmao Jia, Jingde Shan, Baoen Transl Oncol Original article This study aimed to identify the biological processes associated with long-term survival in high-grade serous ovarian cancer (HGSOC). HGSOC cases obtained from The Cancer Genome Atlas Ovarian Cancer (TCGA-OV) database were divided into long-term survivors (LTS) and normal-term survivors (NTS) based on survival cutoffs defined by the HGSOC cohort in the SEER database. Differentially expressed genes (DEGs) were screened using the generalized linear modeling (GLM) method. Gene Ontology (GO) functional and KEGG pathway enrichment analyses were performed using DAVID Bioinformatics Resources. DEG-related protein-protein interactions (PPI) were extracted from the STRING database and hub genes were identified using CytoHubba in the Cytoscape program. In total, 157 DEGs, including 155 upregulated and 2 downregulated genes, were identified. Upregulated genes were statistically enriched in 80 GO terms and 11 KEGG pathways related to energy and substrate metabolism, such as protein absorption, digestion, and metabolism as well as signaling pathways, including chromatin silencing, regulation of ERK1 and ERK2 cascade, and regulation of MAPKKK. ALB and POMC were the common hub genes. These findings reveal that protein anabolism is crucial to long-term survival, regulated by activation of the MAPK/ERK signaling pathway and chromatin silencing. Comprehensive understanding of the molecular mechanisms via further exploration may contribute toward an effective treatment for ovarian cancer. Neoplasia Press 2020-10-09 /pmc/articles/PMC7557892/ /pubmed/33045680 http://dx.doi.org/10.1016/j.tranon.2020.100885 Text en © 2020 Published by Elsevier Inc. on behalf of Neoplasia Press, Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original article Wang, Lingxiang Sun, Tao Li, Shumei Zhang, Zhengmao Jia, Jingde Shan, Baoen Protein anabolism is key to long-term survival in high-grade serous ovarian cancer |
title | Protein anabolism is key to long-term survival in high-grade serous ovarian cancer |
title_full | Protein anabolism is key to long-term survival in high-grade serous ovarian cancer |
title_fullStr | Protein anabolism is key to long-term survival in high-grade serous ovarian cancer |
title_full_unstemmed | Protein anabolism is key to long-term survival in high-grade serous ovarian cancer |
title_short | Protein anabolism is key to long-term survival in high-grade serous ovarian cancer |
title_sort | protein anabolism is key to long-term survival in high-grade serous ovarian cancer |
topic | Original article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7557892/ https://www.ncbi.nlm.nih.gov/pubmed/33045680 http://dx.doi.org/10.1016/j.tranon.2020.100885 |
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