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Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products

Appropriate analytical methods are needed for the detection of food authentication. We investigated the applicability of a duplex real-time PCR assay targeting chromosome 1 and two singleplex real-time PCR assays targeting chromosome 9, both published recently, for the qualitative and quantitative d...

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Autores principales: Kaltenbrunner, Maria, Mayer, Walter, Kerkhoff, Kirsten, Epp, Rita, Rüggeberg, Hermann, Hochegger, Rupert, Cichna-Markl, Margit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7560752/
https://www.ncbi.nlm.nih.gov/pubmed/33057090
http://dx.doi.org/10.1038/s41598-020-72655-7
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author Kaltenbrunner, Maria
Mayer, Walter
Kerkhoff, Kirsten
Epp, Rita
Rüggeberg, Hermann
Hochegger, Rupert
Cichna-Markl, Margit
author_facet Kaltenbrunner, Maria
Mayer, Walter
Kerkhoff, Kirsten
Epp, Rita
Rüggeberg, Hermann
Hochegger, Rupert
Cichna-Markl, Margit
author_sort Kaltenbrunner, Maria
collection PubMed
description Appropriate analytical methods are needed for the detection of food authentication. We investigated the applicability of a duplex real-time PCR assay targeting chromosome 1 and two singleplex real-time PCR assays targeting chromosome 9, both published recently, for the qualitative and quantitative determination of wild boar and domestic pig in processed food products. In addition, two singleplex real-time PCR assays targeting chromosome 7 were tested for their suitability to differentiate the two subspecies. Even by targeting the three genome loci, the probability of misclassification was not completely eliminated. Application of the real-time PCR assays to a total of 35 commercial meat products, including 22 goulash products, revealed that domestic pig DNA was frequently present, even in 14 out of 15 products declared to consist of 100% wild boar. Quantitative results obtained with the real-time PCR assays for wild boar (p < 0.001) and those for domestic pig (p < 0.001) were significantly different. However, the results obtained with the real-time PCR assays for wild boar (r = 0.673; p < 0.001) and those for domestic pig (r = 0.505; p = 0.002) were found to be significantly correlated. If the rules given in the paper are followed, the real-time PCR assays are applicable for routine analysis.
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spelling pubmed-75607522020-10-19 Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products Kaltenbrunner, Maria Mayer, Walter Kerkhoff, Kirsten Epp, Rita Rüggeberg, Hermann Hochegger, Rupert Cichna-Markl, Margit Sci Rep Article Appropriate analytical methods are needed for the detection of food authentication. We investigated the applicability of a duplex real-time PCR assay targeting chromosome 1 and two singleplex real-time PCR assays targeting chromosome 9, both published recently, for the qualitative and quantitative determination of wild boar and domestic pig in processed food products. In addition, two singleplex real-time PCR assays targeting chromosome 7 were tested for their suitability to differentiate the two subspecies. Even by targeting the three genome loci, the probability of misclassification was not completely eliminated. Application of the real-time PCR assays to a total of 35 commercial meat products, including 22 goulash products, revealed that domestic pig DNA was frequently present, even in 14 out of 15 products declared to consist of 100% wild boar. Quantitative results obtained with the real-time PCR assays for wild boar (p < 0.001) and those for domestic pig (p < 0.001) were significantly different. However, the results obtained with the real-time PCR assays for wild boar (r = 0.673; p < 0.001) and those for domestic pig (r = 0.505; p = 0.002) were found to be significantly correlated. If the rules given in the paper are followed, the real-time PCR assays are applicable for routine analysis. Nature Publishing Group UK 2020-10-14 /pmc/articles/PMC7560752/ /pubmed/33057090 http://dx.doi.org/10.1038/s41598-020-72655-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kaltenbrunner, Maria
Mayer, Walter
Kerkhoff, Kirsten
Epp, Rita
Rüggeberg, Hermann
Hochegger, Rupert
Cichna-Markl, Margit
Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products
title Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products
title_full Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products
title_fullStr Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products
title_full_unstemmed Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products
title_short Applicability of a duplex and four singleplex real-time PCR assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products
title_sort applicability of a duplex and four singleplex real-time pcr assays for the qualitative and quantitative determination of wild boar and domestic pig meat in processed food products
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7560752/
https://www.ncbi.nlm.nih.gov/pubmed/33057090
http://dx.doi.org/10.1038/s41598-020-72655-7
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