Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1

Bursaphelenchus xylophilus has been destroying pine forests in East Asia and western Europe. Here, we report its nearly complete genomic sequence containing five ∼12-Mb scaffolds and one ∼15-Mb scaffold representing six chromosomes. Large repeat regions that were previously unidentified are now reas...

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Detalles Bibliográficos
Autores principales: Dayi, Mehmet, Sun, Simo, Maeda, Yasunobu, Tanaka, Ryusei, Yoshida, Akemi, Tsai, Isheng Jason, Kikuchi, Taisei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7561696/
https://www.ncbi.nlm.nih.gov/pubmed/33060277
http://dx.doi.org/10.1128/MRA.01002-20
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author Dayi, Mehmet
Sun, Simo
Maeda, Yasunobu
Tanaka, Ryusei
Yoshida, Akemi
Tsai, Isheng Jason
Kikuchi, Taisei
author_facet Dayi, Mehmet
Sun, Simo
Maeda, Yasunobu
Tanaka, Ryusei
Yoshida, Akemi
Tsai, Isheng Jason
Kikuchi, Taisei
author_sort Dayi, Mehmet
collection PubMed
description Bursaphelenchus xylophilus has been destroying pine forests in East Asia and western Europe. Here, we report its nearly complete genomic sequence containing five ∼12-Mb scaffolds and one ∼15-Mb scaffold representing six chromosomes. Large repeat regions that were previously unidentified are now reasonably integrated, particularly in the ∼15-Mb scaffold.
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spelling pubmed-75616962020-10-30 Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1 Dayi, Mehmet Sun, Simo Maeda, Yasunobu Tanaka, Ryusei Yoshida, Akemi Tsai, Isheng Jason Kikuchi, Taisei Microbiol Resour Announc Genome Sequences Bursaphelenchus xylophilus has been destroying pine forests in East Asia and western Europe. Here, we report its nearly complete genomic sequence containing five ∼12-Mb scaffolds and one ∼15-Mb scaffold representing six chromosomes. Large repeat regions that were previously unidentified are now reasonably integrated, particularly in the ∼15-Mb scaffold. American Society for Microbiology 2020-10-15 /pmc/articles/PMC7561696/ /pubmed/33060277 http://dx.doi.org/10.1128/MRA.01002-20 Text en Copyright © 2020 Dayi et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Dayi, Mehmet
Sun, Simo
Maeda, Yasunobu
Tanaka, Ryusei
Yoshida, Akemi
Tsai, Isheng Jason
Kikuchi, Taisei
Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1
title Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1
title_full Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1
title_fullStr Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1
title_full_unstemmed Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1
title_short Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1
title_sort nearly complete genome assembly of the pinewood nematode bursaphelenchus xylophilus strain ka4c1
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7561696/
https://www.ncbi.nlm.nih.gov/pubmed/33060277
http://dx.doi.org/10.1128/MRA.01002-20
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