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Development of dried tube specimens for Xpert MTB/RIF proficiency testing

BACKGROUND: Proficiency testing (PT) is part of a comprehensive quality assurance programme, which is critical to ensuring patients receive accurate and reliable diagnostic testing. Implementation of the Cepheid Xpert® MTB/RIF assay to aid in the diagnosis of tuberculosis has expanded rapidly in rec...

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Autores principales: DeGruy, Kyle, Klein, Katherine, Rey, Zilma, Hall, Patricia, Kim, Andrea, Alexander, Heather
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AOSIS 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7564946/
https://www.ncbi.nlm.nih.gov/pubmed/33102169
http://dx.doi.org/10.4102/ajlm.v9i1.1166
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author DeGruy, Kyle
Klein, Katherine
Rey, Zilma
Hall, Patricia
Kim, Andrea
Alexander, Heather
author_facet DeGruy, Kyle
Klein, Katherine
Rey, Zilma
Hall, Patricia
Kim, Andrea
Alexander, Heather
author_sort DeGruy, Kyle
collection PubMed
description BACKGROUND: Proficiency testing (PT) is part of a comprehensive quality assurance programme, which is critical to ensuring patients receive accurate and reliable diagnostic testing. Implementation of the Cepheid Xpert® MTB/RIF assay to aid in the diagnosis of tuberculosis has expanded rapidly in recent years; however, PT material for Xpert MTB/RIF is not readily available in many resource-limited settings. OBJECTIVE: To develop an accurate and precise PT material based on the dried tube specimen (DTS) method, using supplies and reagents available in most tuberculosis culture laboratories. METHODS: Dried tube specimens were produced at the United States Centers for Disease Control and Prevention from 2013 to 2015 by inactivating liquid cultures of well-characterised mycobacterial strains. Ten percent of DTS produced were tested with Xpert MTB/RIF and evaluated for accuracy and precision. RESULTS: Validation testing across eight rounds of PT demonstrated that DTS are highly accurate, achieving an average of 96.8% concordance with the Xpert MTB/RIF results from the original mycobacterial strains. Dried tube specimen testing was also precise, with cycle threshold standard deviations below two cycles when inherent test cartridge variability was low. CONCLUSION: Dried tube specimens can be produced using equipment already present in tuberculosis culture laboratories, making Xpert MTB/RIF PT scale-up more feasible in resource-limited settings. Use of DTS may fill the gap in tuberculosis laboratory access to external quality assessment, which is an essential component of a comprehensive continuous quality improvement programme.
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spelling pubmed-75649462020-10-22 Development of dried tube specimens for Xpert MTB/RIF proficiency testing DeGruy, Kyle Klein, Katherine Rey, Zilma Hall, Patricia Kim, Andrea Alexander, Heather Afr J Lab Med Original Research BACKGROUND: Proficiency testing (PT) is part of a comprehensive quality assurance programme, which is critical to ensuring patients receive accurate and reliable diagnostic testing. Implementation of the Cepheid Xpert® MTB/RIF assay to aid in the diagnosis of tuberculosis has expanded rapidly in recent years; however, PT material for Xpert MTB/RIF is not readily available in many resource-limited settings. OBJECTIVE: To develop an accurate and precise PT material based on the dried tube specimen (DTS) method, using supplies and reagents available in most tuberculosis culture laboratories. METHODS: Dried tube specimens were produced at the United States Centers for Disease Control and Prevention from 2013 to 2015 by inactivating liquid cultures of well-characterised mycobacterial strains. Ten percent of DTS produced were tested with Xpert MTB/RIF and evaluated for accuracy and precision. RESULTS: Validation testing across eight rounds of PT demonstrated that DTS are highly accurate, achieving an average of 96.8% concordance with the Xpert MTB/RIF results from the original mycobacterial strains. Dried tube specimen testing was also precise, with cycle threshold standard deviations below two cycles when inherent test cartridge variability was low. CONCLUSION: Dried tube specimens can be produced using equipment already present in tuberculosis culture laboratories, making Xpert MTB/RIF PT scale-up more feasible in resource-limited settings. Use of DTS may fill the gap in tuberculosis laboratory access to external quality assessment, which is an essential component of a comprehensive continuous quality improvement programme. AOSIS 2020-09-29 /pmc/articles/PMC7564946/ /pubmed/33102169 http://dx.doi.org/10.4102/ajlm.v9i1.1166 Text en © 2020. The Authors https://creativecommons.org/licenses/by/4.0/ Licensee: AOSIS. This work is licensed under the Creative Commons Attribution License.
spellingShingle Original Research
DeGruy, Kyle
Klein, Katherine
Rey, Zilma
Hall, Patricia
Kim, Andrea
Alexander, Heather
Development of dried tube specimens for Xpert MTB/RIF proficiency testing
title Development of dried tube specimens for Xpert MTB/RIF proficiency testing
title_full Development of dried tube specimens for Xpert MTB/RIF proficiency testing
title_fullStr Development of dried tube specimens for Xpert MTB/RIF proficiency testing
title_full_unstemmed Development of dried tube specimens for Xpert MTB/RIF proficiency testing
title_short Development of dried tube specimens for Xpert MTB/RIF proficiency testing
title_sort development of dried tube specimens for xpert mtb/rif proficiency testing
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7564946/
https://www.ncbi.nlm.nih.gov/pubmed/33102169
http://dx.doi.org/10.4102/ajlm.v9i1.1166
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