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Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07)
SIMPLE SUMMARY: Even after the introduction of a standard regimen consisting of concurrent chemoradiotherapy and adjuvant temozolomide, patients with glioblastoma multiforme mostly experience disease progression. Clinicians often encounter a situation where they need to distinguish progressive disea...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7564954/ https://www.ncbi.nlm.nih.gov/pubmed/32967367 http://dx.doi.org/10.3390/cancers12092706 |
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author | Jang, Bum-Sup Park, Andrew J. Jeon, Seung Hyuck Kim, Il Han Lim, Do Hoon Park, Shin-Hyung Lee, Ju Hye Chang, Ji Hyun Cho, Kwan Ho Kim, Jin Hee Sunwoo, Leonard Choi, Seung Hong Kim, In Ah |
author_facet | Jang, Bum-Sup Park, Andrew J. Jeon, Seung Hyuck Kim, Il Han Lim, Do Hoon Park, Shin-Hyung Lee, Ju Hye Chang, Ji Hyun Cho, Kwan Ho Kim, Jin Hee Sunwoo, Leonard Choi, Seung Hong Kim, In Ah |
author_sort | Jang, Bum-Sup |
collection | PubMed |
description | SIMPLE SUMMARY: Even after the introduction of a standard regimen consisting of concurrent chemoradiotherapy and adjuvant temozolomide, patients with glioblastoma multiforme mostly experience disease progression. Clinicians often encounter a situation where they need to distinguish progressive disease from pseudoprogression after treatment. We tried to investigate the feasibility of machine learning algorithm to distinguish pseudoprogression from progressive disease. In multi-institutional dataset, the developed machine learning model showed an acceptable performance. This algorithm involving MRI data and clinical features could help making decision during patients’ disease course. For the practical use, we calibrated the machine learning model to offer the probability of pseudoprogression to clinicians, then we constructed the web-based user interface to access the model. ABSTRACT: Some patients with glioblastoma show a worsening presentation in imaging after concurrent chemoradiation, even when they receive gross total resection. Previously, we showed the feasibility of a machine learning model to predict pseudoprogression (PsPD) versus progressive disease (PD) in glioblastoma patients. The previous model was based on the dataset from two institutions (termed as the Seoul National University Hospital (SNUH) dataset, N = 78). To test this model in a larger dataset, we collected cases from multiple institutions that raised the problem of PsPD vs. PD diagnosis in clinics (Korean Radiation Oncology Group (KROG) dataset, N = 104). The dataset was composed of brain MR images and clinical information. We tested the previous model in the KROG dataset; however, that model showed limited performance. After hyperparameter optimization, we developed a deep learning model based on the whole dataset (N = 182). The 10-fold cross validation revealed that the micro-average area under the precision-recall curve (AUPRC) was 0.86. The calibration model was constructed to estimate the interpretable probability directly from the model output. After calibration, the final model offers clinical probability in a web-user interface. |
format | Online Article Text |
id | pubmed-7564954 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75649542020-10-26 Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07) Jang, Bum-Sup Park, Andrew J. Jeon, Seung Hyuck Kim, Il Han Lim, Do Hoon Park, Shin-Hyung Lee, Ju Hye Chang, Ji Hyun Cho, Kwan Ho Kim, Jin Hee Sunwoo, Leonard Choi, Seung Hong Kim, In Ah Cancers (Basel) Article SIMPLE SUMMARY: Even after the introduction of a standard regimen consisting of concurrent chemoradiotherapy and adjuvant temozolomide, patients with glioblastoma multiforme mostly experience disease progression. Clinicians often encounter a situation where they need to distinguish progressive disease from pseudoprogression after treatment. We tried to investigate the feasibility of machine learning algorithm to distinguish pseudoprogression from progressive disease. In multi-institutional dataset, the developed machine learning model showed an acceptable performance. This algorithm involving MRI data and clinical features could help making decision during patients’ disease course. For the practical use, we calibrated the machine learning model to offer the probability of pseudoprogression to clinicians, then we constructed the web-based user interface to access the model. ABSTRACT: Some patients with glioblastoma show a worsening presentation in imaging after concurrent chemoradiation, even when they receive gross total resection. Previously, we showed the feasibility of a machine learning model to predict pseudoprogression (PsPD) versus progressive disease (PD) in glioblastoma patients. The previous model was based on the dataset from two institutions (termed as the Seoul National University Hospital (SNUH) dataset, N = 78). To test this model in a larger dataset, we collected cases from multiple institutions that raised the problem of PsPD vs. PD diagnosis in clinics (Korean Radiation Oncology Group (KROG) dataset, N = 104). The dataset was composed of brain MR images and clinical information. We tested the previous model in the KROG dataset; however, that model showed limited performance. After hyperparameter optimization, we developed a deep learning model based on the whole dataset (N = 182). The 10-fold cross validation revealed that the micro-average area under the precision-recall curve (AUPRC) was 0.86. The calibration model was constructed to estimate the interpretable probability directly from the model output. After calibration, the final model offers clinical probability in a web-user interface. MDPI 2020-09-21 /pmc/articles/PMC7564954/ /pubmed/32967367 http://dx.doi.org/10.3390/cancers12092706 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Jang, Bum-Sup Park, Andrew J. Jeon, Seung Hyuck Kim, Il Han Lim, Do Hoon Park, Shin-Hyung Lee, Ju Hye Chang, Ji Hyun Cho, Kwan Ho Kim, Jin Hee Sunwoo, Leonard Choi, Seung Hong Kim, In Ah Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07) |
title | Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07) |
title_full | Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07) |
title_fullStr | Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07) |
title_full_unstemmed | Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07) |
title_short | Machine Learning Model to Predict Pseudoprogression Versus Progression in Glioblastoma Using MRI: A Multi-Institutional Study (KROG 18-07) |
title_sort | machine learning model to predict pseudoprogression versus progression in glioblastoma using mri: a multi-institutional study (krog 18-07) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7564954/ https://www.ncbi.nlm.nih.gov/pubmed/32967367 http://dx.doi.org/10.3390/cancers12092706 |
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