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The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes
The genus Helianthus is a diverse taxonomic group with approximately 50 species. Most sunflower genomic investigations are devoted to economically valuable species, e.g., H. annuus, while other Helianthus species, especially perennial, are predominantly a blind spot. In the current study, we have as...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7565312/ https://www.ncbi.nlm.nih.gov/pubmed/32846894 http://dx.doi.org/10.3390/genes11090982 |
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author | Makarenko, Maksim Usatov, Alexander Tatarinova, Tatiana Azarin, Kirill Kovalevich, Alexey Gavrilova, Vera Horn, Renate |
author_facet | Makarenko, Maksim Usatov, Alexander Tatarinova, Tatiana Azarin, Kirill Kovalevich, Alexey Gavrilova, Vera Horn, Renate |
author_sort | Makarenko, Maksim |
collection | PubMed |
description | The genus Helianthus is a diverse taxonomic group with approximately 50 species. Most sunflower genomic investigations are devoted to economically valuable species, e.g., H. annuus, while other Helianthus species, especially perennial, are predominantly a blind spot. In the current study, we have assembled the complete mitogenomes of two perennial species: H. grosseserratus (273,543 bp) and H. strumosus (281,055 bp). We analyzed their sequences and gene profiles in comparison to the available complete mitogenomes of H. annuus. Except for sdh4 and trnA-UGC, both perennial sunflower species had the same gene content and almost identical protein-coding sequences when compared with each other and with annual sunflowers (H. annuus). Common mitochondrial open reading frames (ORFs) (orf117, orf139, and orf334) in sunflowers and unique ORFs for H. grosseserratus (orf633) and H. strumosus (orf126, orf184, orf207) were identified. The maintenance of plastid-derived coding sequences in the mitogenomes of both annual and perennial sunflowers and the low frequency of nonsynonymous mutations point at an extremely low variability of mitochondrial DNA (mtDNA) coding sequences in the Helianthus genus. |
format | Online Article Text |
id | pubmed-7565312 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75653122020-10-26 The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes Makarenko, Maksim Usatov, Alexander Tatarinova, Tatiana Azarin, Kirill Kovalevich, Alexey Gavrilova, Vera Horn, Renate Genes (Basel) Article The genus Helianthus is a diverse taxonomic group with approximately 50 species. Most sunflower genomic investigations are devoted to economically valuable species, e.g., H. annuus, while other Helianthus species, especially perennial, are predominantly a blind spot. In the current study, we have assembled the complete mitogenomes of two perennial species: H. grosseserratus (273,543 bp) and H. strumosus (281,055 bp). We analyzed their sequences and gene profiles in comparison to the available complete mitogenomes of H. annuus. Except for sdh4 and trnA-UGC, both perennial sunflower species had the same gene content and almost identical protein-coding sequences when compared with each other and with annual sunflowers (H. annuus). Common mitochondrial open reading frames (ORFs) (orf117, orf139, and orf334) in sunflowers and unique ORFs for H. grosseserratus (orf633) and H. strumosus (orf126, orf184, orf207) were identified. The maintenance of plastid-derived coding sequences in the mitogenomes of both annual and perennial sunflowers and the low frequency of nonsynonymous mutations point at an extremely low variability of mitochondrial DNA (mtDNA) coding sequences in the Helianthus genus. MDPI 2020-08-24 /pmc/articles/PMC7565312/ /pubmed/32846894 http://dx.doi.org/10.3390/genes11090982 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Makarenko, Maksim Usatov, Alexander Tatarinova, Tatiana Azarin, Kirill Kovalevich, Alexey Gavrilova, Vera Horn, Renate The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes |
title | The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes |
title_full | The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes |
title_fullStr | The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes |
title_full_unstemmed | The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes |
title_short | The Investigation of Perennial Sunflower Species (Helianthus L.) Mitochondrial Genomes |
title_sort | investigation of perennial sunflower species (helianthus l.) mitochondrial genomes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7565312/ https://www.ncbi.nlm.nih.gov/pubmed/32846894 http://dx.doi.org/10.3390/genes11090982 |
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