IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring

BACKGROUND: Metagenomic next-generation sequencing (mNGS) has enabled the rapid, unbiased detection and identification of microbes without pathogen-specific reagents, culturing, or a priori knowledge of the microbial landscape. mNGS data analysis requires a series of computationally intensive proces...

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Detalles Bibliográficos
Autores principales: Kalantar, Katrina L, Carvalho, Tiago, de Bourcy, Charles F A, Dimitrov, Boris, Dingle, Greg, Egger, Rebecca, Han, Julie, Holmes, Olivia B, Juan, Yun-Fang, King, Ryan, Kislyuk, Andrey, Lin, Michael F, Mariano, Maria, Morse, Todd, Reynoso, Lucia V, Cruz, David Rissato, Sheu, Jonathan, Tang, Jennifer, Wang, James, Zhang, Mark A, Zhong, Emily, Ahyong, Vida, Lay, Sreyngim, Chea, Sophana, Bohl, Jennifer A, Manning, Jessica E, Tato, Cristina M, DeRisi, Joseph L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7566497/
https://www.ncbi.nlm.nih.gov/pubmed/33057676
http://dx.doi.org/10.1093/gigascience/giaa111

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