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Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients

BACKGROUND: We used bioinformatic analysis and quantitative reverse transcription polymerase chain reaction (RT-qPCR) assays to investigate the association between plasma microRNAs (miRNAs) and stable warfarin dosage in a Chinese Han population. METHODS: Bioinformatics analysis was used to screen ou...

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Autores principales: Zhao, Li, Wang, Jin, Shi, Shaoxin, Wu, Yuan, Liu, Jumei, He, Shiwei, Zou, Yue, Xie, Huabin, Ge, Shengxiang, Ye, Huiming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7566751/
https://www.ncbi.nlm.nih.gov/pubmed/33083118
http://dx.doi.org/10.7717/peerj.9995
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author Zhao, Li
Wang, Jin
Shi, Shaoxin
Wu, Yuan
Liu, Jumei
He, Shiwei
Zou, Yue
Xie, Huabin
Ge, Shengxiang
Ye, Huiming
author_facet Zhao, Li
Wang, Jin
Shi, Shaoxin
Wu, Yuan
Liu, Jumei
He, Shiwei
Zou, Yue
Xie, Huabin
Ge, Shengxiang
Ye, Huiming
author_sort Zhao, Li
collection PubMed
description BACKGROUND: We used bioinformatic analysis and quantitative reverse transcription polymerase chain reaction (RT-qPCR) assays to investigate the association between plasma microRNAs (miRNAs) and stable warfarin dosage in a Chinese Han population. METHODS: Bioinformatics analysis was used to screen out potential warfarin dose-associated miRNAs. Three plasma miRNAs were validated in 99 samples by RT-qPCR. Kruskal–Wallis test and multivariate logistic regression were used to compare differences in plasma miRNAs expression levels between three warfarin dosage groups. RESULTS: There were significant between-group differences among the three dose groups for hsa-miR-133b expression (p = 0.005), but we observed an “n-shaped” dose-dependent curve rather than a linear relationship. Expression levels of hsa-miR-24-3p (p = 0.475) and hsa-miR-1276 (p = 0.558) were not significantly different in the multivariate logistic regression. CONCLUSION: miRNAs have received extensive attention as ideal biomarkers and possible therapeutic targets for various diseases. However, they are not yet widely used in precision medicine. Our results indicate that hsa-miR-133b may be a possible reference factor for the warfarin dosage algorithm. These findings emphasize the importance of a comprehensive evaluation of complex relationships in warfarin dose prediction models and provide new avenues for future pharmacogenomics studies.
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spelling pubmed-75667512020-10-19 Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients Zhao, Li Wang, Jin Shi, Shaoxin Wu, Yuan Liu, Jumei He, Shiwei Zou, Yue Xie, Huabin Ge, Shengxiang Ye, Huiming PeerJ Bioinformatics BACKGROUND: We used bioinformatic analysis and quantitative reverse transcription polymerase chain reaction (RT-qPCR) assays to investigate the association between plasma microRNAs (miRNAs) and stable warfarin dosage in a Chinese Han population. METHODS: Bioinformatics analysis was used to screen out potential warfarin dose-associated miRNAs. Three plasma miRNAs were validated in 99 samples by RT-qPCR. Kruskal–Wallis test and multivariate logistic regression were used to compare differences in plasma miRNAs expression levels between three warfarin dosage groups. RESULTS: There were significant between-group differences among the three dose groups for hsa-miR-133b expression (p = 0.005), but we observed an “n-shaped” dose-dependent curve rather than a linear relationship. Expression levels of hsa-miR-24-3p (p = 0.475) and hsa-miR-1276 (p = 0.558) were not significantly different in the multivariate logistic regression. CONCLUSION: miRNAs have received extensive attention as ideal biomarkers and possible therapeutic targets for various diseases. However, they are not yet widely used in precision medicine. Our results indicate that hsa-miR-133b may be a possible reference factor for the warfarin dosage algorithm. These findings emphasize the importance of a comprehensive evaluation of complex relationships in warfarin dose prediction models and provide new avenues for future pharmacogenomics studies. PeerJ Inc. 2020-10-13 /pmc/articles/PMC7566751/ /pubmed/33083118 http://dx.doi.org/10.7717/peerj.9995 Text en ©2020 Zhao et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Zhao, Li
Wang, Jin
Shi, Shaoxin
Wu, Yuan
Liu, Jumei
He, Shiwei
Zou, Yue
Xie, Huabin
Ge, Shengxiang
Ye, Huiming
Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients
title Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients
title_full Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients
title_fullStr Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients
title_full_unstemmed Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients
title_short Plasma miRNA profiles associated with stable warfarin dosage in Chinese patients
title_sort plasma mirna profiles associated with stable warfarin dosage in chinese patients
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7566751/
https://www.ncbi.nlm.nih.gov/pubmed/33083118
http://dx.doi.org/10.7717/peerj.9995
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