Cargando…

NGS_SNPAnalyzer: a desktop software supporting genome projects by identifying and visualizing sequence variations from next-generation sequencing data

BACKGROUND: Sequence variations such as single nucleotide polymorphisms are markers for genetic diseases and breeding. Therefore, identifying sequence variations is one of the main objectives of several genome projects. Although most genome project consortiums provide standard operation procedures f...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lee, Dong-Jun, Kwon, Taesoo, Kim, Chang-Kug, Seol, Young-Joo, Park, Dong-Suk, Lee, Tae-Ho, Ahn, Byung-Ohg
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Springer Singapore 2020
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7567733/ https://www.ncbi.nlm.nih.gov/pubmed/32980993 http://dx.doi.org/10.1007/s13258-020-00997-7

Ejemplares similares

NGSpop: A desktop software that supports population studies by identifying sequence variations from next-generation sequencing data
por: Lee, Dong-Jun, et al.
Publicado: (2022)

nsSNPAnalyzer: identifying disease-associated nonsynonymous single nucleotide polymorphisms
por: Bao, Lei, et al.
Publicado: (2005)

NgsRelate: a software tool for estimating pairwise relatedness from next-generation sequencing data
por: Korneliussen, Thorfinn Sand, et al.
Publicado: (2015)

SNPAnalyzer: a web-based integrated workbench for single-nucleotide polymorphism analysis
por: Yoo, Jinho, et al.
Publicado: (2005)

Current Advances in Nanotechnology for the Next Generation of Sequencing (NGS)
por: Bracamonte, Angel Guillermo
Publicado: (2023)

SNPAnalyzer 2.0: A web-based integrated workbench for linkage disequilibrium analysis and association analysis
por: Yoo, Jinho, et al.
Publicado: (2008)

Next-Generation Sequencing (NGS) and Third-Generation Sequencing (TGS) for the Diagnosis of Thalassemia
por: Hassan, Syahzuwan, et al.
Publicado: (2023)

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
por: Kearse, Matthew, et al.
Publicado: (2012)

Next generation sequencing (NGS) strategies for the genetic testing of myopathies
por: NIGRO, VINCENZO, et al.
Publicado: (2012)

NGS-Trex: Next Generation Sequencing Transcriptome profile explorer
por: Boria, Ilenia, et al.
Publicado: (2013)

GAM-NGS: genomic assemblies merger for next generation sequencing
por: Vicedomini, Riccardo, et al.
Publicado: (2013)

Initiative for standardization of the format of the next-generation sequencing (NGS) results
por: Pipan, Veronika, et al.
Publicado: (2015)

Editorial: Next Generation Sequencing (NGS) for Rare Diseases Diagnosis
por: Yang, Xiu-An
Publicado: (2021)

Editorial: Application of Next Generation Sequencing (NGS) in Infection Prevention
por: Kemp, Michael, et al.
Publicado: (2022)

P1006: NEXT GENERATION SEQUENCING (NGS) IN PEDIATRIC MASTOCYTOSIS
por: Angi, A., et al.
Publicado: (2022)

Next Generation Sequencing (NGS) Target Approach for Undiagnosed Dysglycaemia
por: Aloi, Concetta, et al.
Publicado: (2023)

The Complete Chloroplast Genome of the Hare’s Ear Root, Bupleurum falcatum: Its Molecular Features
por: Shin, Dong-Ho, et al.
Publicado: (2016)

Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer
por: Peterlongo, Pierre, et al.
Publicado: (2012)

FastProNGS: fast preprocessing of next-generation sequencing reads
por: Liu, Xiaoshuang, et al.
Publicado: (2019)

Role and clinical application of next-generation sequencing (NGS) for ovarian cancer
por: Lim, Myong Cheol, et al.
Publicado: (2017)

Targeted Next Generation Sequencing (NGS) to Diagnose Hereditary Hemolytic Anemias
por: Bharadwaj, Rishab, et al.
Publicado: (2020)

Fluorescent amplification for next generation sequencing (FA-NGS) library preparation
por: Chiniquy, Jennifer, et al.
Publicado: (2020)

Framework for Adoption of Next-Generation Sequencing (NGS) Globally in the Oncology Area
por: Horgan, Denis, et al.
Publicado: (2023)

Evaluating next‐generation sequencing (NGS) methods for routine monitoring of wild bees: Metabarcoding, mitogenomics or NGS barcoding
por: Gueuning, Morgan, et al.
Publicado: (2019)

NGS-based deep bisulfite sequencing
por: Lee, Suman, et al.
Publicado: (2015)

Optimizing Information in Next-Generation-Sequencing (NGS) Reads for Improving De Novo Genome Assembly
por: Liu, Tsunglin, et al.
Publicado: (2013)

Client-server software testing on the desktop and the Web
por: Mosley, Daniel J.
Publicado: (2000)

How will next generation sequencing (NGS) improve the diagnosis of congenital hemolytic anemia?
por: Bianchi, Paola, et al.
Publicado: (2020)

Editorial: Next generation sequencing (NGS) for rare diseases diagnosis ‐ Volume II
por: Yang, Xiu-An, et al.
Publicado: (2023)

1744. Next generation sequencing (NGS) optimization of Oral Polio Vaccine samples
por: Carrington, Yuan J, et al.
Publicado: (2023)

AnsNGS: An Annotation System to Sequence Variations of Next Generation Sequencing Data for Disease-Related Phenotypes
por: Na, Young-Ji, et al.
Publicado: (2013)

Preliminary Information of Iranian Lizard Leishmania Promastigote Transcriptome Sequencing by Next Generation Sequencing (NGS) Method
por: Ehya, Farveh, et al.
Publicado: (2023)

Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants
por: Taheri, Sima, et al.
Publicado: (2018)

FastContext: A tool for identification of adapters and other sequence patterns in next generation sequencing (NGS) data
por: Viesná, Е., et al.
Publicado: (2022)

MICA: desktop software for comprehensive searching of DNA databases
por: Stokes, William A, et al.
Publicado: (2006)

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data
por: Patel, Ravi K., et al.
Publicado: (2012)

ViennaNGS: A toolbox for building efficient next- generation sequencing analysis pipelines
por: Wolfinger, Michael T., et al.
Publicado: (2015)

Detection of Respiratory Pathogens in Parapneumonic Effusions by Hypothesis-free, Next-Generation Sequencing (NGS)
por: Ampofo, Krow, et al.
Publicado: (2017)

Next Generation Sequencing Plus (NGS+) with Y-chromosomal Markers for Forensic Pedigree Searches
por: Qian, Xiaoqin, et al.
Publicado: (2017)

Advancing leukemia diagnostics: Role of Next Generation Sequencing (NGS) in acute myeloid leukemia
por: Haferlach, Torsten
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_060ju1nnoog9h2g7a2vnsu9kbu