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Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers

Prebiotic chemists often study how modern biopolymers, e.g., peptides and nucleic acids, could have originated in the primitive environment, though most contemporary biomonomers don’t spontaneously oligomerize under mild conditions without activation or catalysis. However, life may not have originat...

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Autores principales: Chandru, Kuhan, Jia, Tony Z., Mamajanov, Irena, Bapat, Niraja, Cleaves, H. James
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7567815/
https://www.ncbi.nlm.nih.gov/pubmed/33067516
http://dx.doi.org/10.1038/s41598-020-74223-5
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author Chandru, Kuhan
Jia, Tony Z.
Mamajanov, Irena
Bapat, Niraja
Cleaves, H. James
author_facet Chandru, Kuhan
Jia, Tony Z.
Mamajanov, Irena
Bapat, Niraja
Cleaves, H. James
author_sort Chandru, Kuhan
collection PubMed
description Prebiotic chemists often study how modern biopolymers, e.g., peptides and nucleic acids, could have originated in the primitive environment, though most contemporary biomonomers don’t spontaneously oligomerize under mild conditions without activation or catalysis. However, life may not have originated using the same monomeric components that it does presently. There may be numerous non-biological (or “xenobiological”) monomer types that were prebiotically abundant and capable of facile oligomerization and self-assembly. Many modern biopolymers degrade abiotically preferentially via processes which produce thermodynamically stable ring structures, e.g. diketopiperazines in the case of proteins and 2′, 3′-cyclic nucleotide monophosphates in the case of RNA. This weakness is overcome in modern biological systems by kinetic control, but this need not have been the case for primitive systems. We explored here the oligomerization of a structurally diverse set of prebiotically plausible xenobiological monomers, which can hydrolytically interconvert between cyclic and acyclic forms, alone or in the presence of glycine under moderate temperature drying conditions. These monomers included various lactones, lactams and a thiolactone, which varied markedly in their stability, propensity to oligomerize and apparent modes of initiation, and the oligomeric products of some of these formed self-organized microscopic structures which may be relevant to protocell formation.
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spelling pubmed-75678152020-10-19 Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers Chandru, Kuhan Jia, Tony Z. Mamajanov, Irena Bapat, Niraja Cleaves, H. James Sci Rep Article Prebiotic chemists often study how modern biopolymers, e.g., peptides and nucleic acids, could have originated in the primitive environment, though most contemporary biomonomers don’t spontaneously oligomerize under mild conditions without activation or catalysis. However, life may not have originated using the same monomeric components that it does presently. There may be numerous non-biological (or “xenobiological”) monomer types that were prebiotically abundant and capable of facile oligomerization and self-assembly. Many modern biopolymers degrade abiotically preferentially via processes which produce thermodynamically stable ring structures, e.g. diketopiperazines in the case of proteins and 2′, 3′-cyclic nucleotide monophosphates in the case of RNA. This weakness is overcome in modern biological systems by kinetic control, but this need not have been the case for primitive systems. We explored here the oligomerization of a structurally diverse set of prebiotically plausible xenobiological monomers, which can hydrolytically interconvert between cyclic and acyclic forms, alone or in the presence of glycine under moderate temperature drying conditions. These monomers included various lactones, lactams and a thiolactone, which varied markedly in their stability, propensity to oligomerize and apparent modes of initiation, and the oligomeric products of some of these formed self-organized microscopic structures which may be relevant to protocell formation. Nature Publishing Group UK 2020-10-16 /pmc/articles/PMC7567815/ /pubmed/33067516 http://dx.doi.org/10.1038/s41598-020-74223-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Chandru, Kuhan
Jia, Tony Z.
Mamajanov, Irena
Bapat, Niraja
Cleaves, H. James
Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers
title Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers
title_full Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers
title_fullStr Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers
title_full_unstemmed Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers
title_short Prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers
title_sort prebiotic oligomerization and self-assembly of structurally diverse xenobiological monomers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7567815/
https://www.ncbi.nlm.nih.gov/pubmed/33067516
http://dx.doi.org/10.1038/s41598-020-74223-5
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