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Protein conformational entropy is not slaved to water
Conformational entropy can be an important element of the thermodynamics of protein functions such as the binding of ligands. The observed role for conformational entropy in modulating molecular recognition by proteins is in opposition to an often-invoked theory for the interaction of protein molecu...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7567893/ https://www.ncbi.nlm.nih.gov/pubmed/33067552 http://dx.doi.org/10.1038/s41598-020-74382-5 |
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author | Marques, Bryan S. Stetz, Matthew A. Jorge, Christine Valentine, Kathleen G. Wand, A. Joshua Nucci, Nathaniel V. |
author_facet | Marques, Bryan S. Stetz, Matthew A. Jorge, Christine Valentine, Kathleen G. Wand, A. Joshua Nucci, Nathaniel V. |
author_sort | Marques, Bryan S. |
collection | PubMed |
description | Conformational entropy can be an important element of the thermodynamics of protein functions such as the binding of ligands. The observed role for conformational entropy in modulating molecular recognition by proteins is in opposition to an often-invoked theory for the interaction of protein molecules with solvent water. The “solvent slaving” model predicts that protein motion is strongly coupled to various aspects of water such as bulk solvent viscosity and local hydration shell dynamics. Changes in conformational entropy are manifested in alterations of fast internal side chain motion that is detectable by NMR relaxation. We show here that the fast-internal side chain dynamics of several proteins are unaffected by changes to the hydration layer and bulk water. These observations indicate that the participation of conformational entropy in protein function is not dictated by the interaction of protein molecules and solvent water under the range of conditions normally encountered. |
format | Online Article Text |
id | pubmed-7567893 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-75678932020-10-19 Protein conformational entropy is not slaved to water Marques, Bryan S. Stetz, Matthew A. Jorge, Christine Valentine, Kathleen G. Wand, A. Joshua Nucci, Nathaniel V. Sci Rep Article Conformational entropy can be an important element of the thermodynamics of protein functions such as the binding of ligands. The observed role for conformational entropy in modulating molecular recognition by proteins is in opposition to an often-invoked theory for the interaction of protein molecules with solvent water. The “solvent slaving” model predicts that protein motion is strongly coupled to various aspects of water such as bulk solvent viscosity and local hydration shell dynamics. Changes in conformational entropy are manifested in alterations of fast internal side chain motion that is detectable by NMR relaxation. We show here that the fast-internal side chain dynamics of several proteins are unaffected by changes to the hydration layer and bulk water. These observations indicate that the participation of conformational entropy in protein function is not dictated by the interaction of protein molecules and solvent water under the range of conditions normally encountered. Nature Publishing Group UK 2020-10-16 /pmc/articles/PMC7567893/ /pubmed/33067552 http://dx.doi.org/10.1038/s41598-020-74382-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Marques, Bryan S. Stetz, Matthew A. Jorge, Christine Valentine, Kathleen G. Wand, A. Joshua Nucci, Nathaniel V. Protein conformational entropy is not slaved to water |
title | Protein conformational entropy is not slaved to water |
title_full | Protein conformational entropy is not slaved to water |
title_fullStr | Protein conformational entropy is not slaved to water |
title_full_unstemmed | Protein conformational entropy is not slaved to water |
title_short | Protein conformational entropy is not slaved to water |
title_sort | protein conformational entropy is not slaved to water |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7567893/ https://www.ncbi.nlm.nih.gov/pubmed/33067552 http://dx.doi.org/10.1038/s41598-020-74382-5 |
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