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Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species
Strobilomyces is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the g...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7567967/ https://www.ncbi.nlm.nih.gov/pubmed/33116338 http://dx.doi.org/10.3767/persoonia.2020.44.05 |
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author | Han, L.H. Wu, G. Horak, E. Halling, R.E. Xu, J. Ndolo, E.S.T. Sato, H. Fechner, N. Sharma, Y.P. Yang, Z.L. |
author_facet | Han, L.H. Wu, G. Horak, E. Halling, R.E. Xu, J. Ndolo, E.S.T. Sato, H. Fechner, N. Sharma, Y.P. Yang, Z.L. |
author_sort | Han, L.H. |
collection | PubMed |
description | Strobilomyces is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of Strobilomyces was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (RPB1 and RPB2); the translation elongation factor subunit 1-α (TEF1); and the mitochondrial cytochrome oxidase subunit 3 (COX3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. Strobilomyces and sect. Echinati. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of Strobilomyces. Our comparisons suggest that, there are a total of 31 distinct species, while S. sanmingensis, S. verruculosus, S. subnigricans, and S. zangii/S. areolatus, are synonyms of S. mirandus, S. giganteus, S. alpinus and S. seminudus, respectively. Eight new species, namely, S. albidus, S. anthracinus, S. calidus, S. cingulatus, S. densisquamosus, S. douformis, S. microreticulatus and S. pinophilus, are described. A dichotomous key to the Asian Strobilomyces species is provided. |
format | Online Article Text |
id | pubmed-7567967 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures |
record_format | MEDLINE/PubMed |
spelling | pubmed-75679672020-10-27 Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species Han, L.H. Wu, G. Horak, E. Halling, R.E. Xu, J. Ndolo, E.S.T. Sato, H. Fechner, N. Sharma, Y.P. Yang, Z.L. Persoonia Research Article Strobilomyces is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of Strobilomyces was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (RPB1 and RPB2); the translation elongation factor subunit 1-α (TEF1); and the mitochondrial cytochrome oxidase subunit 3 (COX3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. Strobilomyces and sect. Echinati. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of Strobilomyces. Our comparisons suggest that, there are a total of 31 distinct species, while S. sanmingensis, S. verruculosus, S. subnigricans, and S. zangii/S. areolatus, are synonyms of S. mirandus, S. giganteus, S. alpinus and S. seminudus, respectively. Eight new species, namely, S. albidus, S. anthracinus, S. calidus, S. cingulatus, S. densisquamosus, S. douformis, S. microreticulatus and S. pinophilus, are described. A dichotomous key to the Asian Strobilomyces species is provided. Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures 2019-12-16 2020-06 /pmc/articles/PMC7567967/ /pubmed/33116338 http://dx.doi.org/10.3767/persoonia.2020.44.05 Text en © 2019 Naturalis Biodiversity Center & Westerdijk Fungal Biodiversity Institute http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode.Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
spellingShingle | Research Article Han, L.H. Wu, G. Horak, E. Halling, R.E. Xu, J. Ndolo, E.S.T. Sato, H. Fechner, N. Sharma, Y.P. Yang, Z.L. Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species |
title | Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species |
title_full | Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species |
title_fullStr | Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species |
title_full_unstemmed | Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species |
title_short | Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species |
title_sort | phylogeny and species delimitation of strobilomyces (boletaceae), with an emphasis on the asian species |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7567967/ https://www.ncbi.nlm.nih.gov/pubmed/33116338 http://dx.doi.org/10.3767/persoonia.2020.44.05 |
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