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MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients

Various AI functionalities such as pattern recognition and prediction can effectively be used to diagnose (recognize) and predict coronavirus disease 2019 (COVID-19) infections and propose timely response (remedial action) to minimize the spread and impact of the virus. Motivated by this, an AI syst...

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Detalles Bibliográficos
Autores principales: Shorfuzzaman, Mohammad, Hossain, M. Shamim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7568501/
https://www.ncbi.nlm.nih.gov/pubmed/33100403
http://dx.doi.org/10.1016/j.patcog.2020.107700
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author Shorfuzzaman, Mohammad
Hossain, M. Shamim
author_facet Shorfuzzaman, Mohammad
Hossain, M. Shamim
author_sort Shorfuzzaman, Mohammad
collection PubMed
description Various AI functionalities such as pattern recognition and prediction can effectively be used to diagnose (recognize) and predict coronavirus disease 2019 (COVID-19) infections and propose timely response (remedial action) to minimize the spread and impact of the virus. Motivated by this, an AI system based on deep meta learning has been proposed in this research to accelerate analysis of chest X-ray (CXR) images in automatic detection of COVID-19 cases. We present a synergistic approach to integrate contrastive learning with a fine-tuned pre-trained ConvNet encoder to capture unbiased feature representations and leverage a Siamese network for final classification of COVID-19 cases. We validate the effectiveness of our proposed model using two publicly available datasets comprising images from normal, COVID-19 and other pneumonia infected categories. Our model achieves 95.6% accuracy and AUC of 0.97 in diagnosing COVID-19 from CXR images even with a limited number of training samples.
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spelling pubmed-75685012020-10-19 MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients Shorfuzzaman, Mohammad Hossain, M. Shamim Pattern Recognit Article Various AI functionalities such as pattern recognition and prediction can effectively be used to diagnose (recognize) and predict coronavirus disease 2019 (COVID-19) infections and propose timely response (remedial action) to minimize the spread and impact of the virus. Motivated by this, an AI system based on deep meta learning has been proposed in this research to accelerate analysis of chest X-ray (CXR) images in automatic detection of COVID-19 cases. We present a synergistic approach to integrate contrastive learning with a fine-tuned pre-trained ConvNet encoder to capture unbiased feature representations and leverage a Siamese network for final classification of COVID-19 cases. We validate the effectiveness of our proposed model using two publicly available datasets comprising images from normal, COVID-19 and other pneumonia infected categories. Our model achieves 95.6% accuracy and AUC of 0.97 in diagnosing COVID-19 from CXR images even with a limited number of training samples. Elsevier Ltd. 2021-05 2020-10-17 /pmc/articles/PMC7568501/ /pubmed/33100403 http://dx.doi.org/10.1016/j.patcog.2020.107700 Text en © 2020 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Shorfuzzaman, Mohammad
Hossain, M. Shamim
MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients
title MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients
title_full MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients
title_fullStr MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients
title_full_unstemmed MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients
title_short MetaCOVID: A Siamese neural network framework with contrastive loss for n-shot diagnosis of COVID-19 patients
title_sort metacovid: a siamese neural network framework with contrastive loss for n-shot diagnosis of covid-19 patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7568501/
https://www.ncbi.nlm.nih.gov/pubmed/33100403
http://dx.doi.org/10.1016/j.patcog.2020.107700
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