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An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
Alternative splicing (AS), an essential process for the maturation of mRNAs, is involved in tumorigenesis and tumor progression, including angiogenesis, apoptosis, and metastasis. AS changes can be frequently observed in different tumors, especially in geriatric lung adenocarcinoma (GLAD). Previous...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7569206/ https://www.ncbi.nlm.nih.gov/pubmed/33000861 http://dx.doi.org/10.1042/BSR20202338 |
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author | Wang, Yidi Wang, Yaxuan Li, Kenan Du, Yabing Cui, Kang Yu, Pu Zhang, Tengfei Liu, Hong Ma, Wang |
author_facet | Wang, Yidi Wang, Yaxuan Li, Kenan Du, Yabing Cui, Kang Yu, Pu Zhang, Tengfei Liu, Hong Ma, Wang |
author_sort | Wang, Yidi |
collection | PubMed |
description | Alternative splicing (AS), an essential process for the maturation of mRNAs, is involved in tumorigenesis and tumor progression, including angiogenesis, apoptosis, and metastasis. AS changes can be frequently observed in different tumors, especially in geriatric lung adenocarcinoma (GLAD). Previous studies have reported an association between AS events and tumorigenesis but have lacked a systematic analysis of its underlying mechanisms. In the present study, we obtained splicing event information from SpliceSeq and clinical information regarding GLAD from The Cancer Genome Atlas. Survival-associated AS events were selected to construct eight prognostic index (PI) models. We also constructed a correlation network between splicing factors (SFs) and survival-related AS events to identify a potential molecular mechanism involved in regulating AS-related events in GLAD. Our study findings confirm that AS has a strong prognostic value for GLAD and sheds light on the clinical significance of targeting SFs in the treatment of GLAD. |
format | Online Article Text |
id | pubmed-7569206 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-75692062020-10-23 An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors Wang, Yidi Wang, Yaxuan Li, Kenan Du, Yabing Cui, Kang Yu, Pu Zhang, Tengfei Liu, Hong Ma, Wang Biosci Rep Cancer Alternative splicing (AS), an essential process for the maturation of mRNAs, is involved in tumorigenesis and tumor progression, including angiogenesis, apoptosis, and metastasis. AS changes can be frequently observed in different tumors, especially in geriatric lung adenocarcinoma (GLAD). Previous studies have reported an association between AS events and tumorigenesis but have lacked a systematic analysis of its underlying mechanisms. In the present study, we obtained splicing event information from SpliceSeq and clinical information regarding GLAD from The Cancer Genome Atlas. Survival-associated AS events were selected to construct eight prognostic index (PI) models. We also constructed a correlation network between splicing factors (SFs) and survival-related AS events to identify a potential molecular mechanism involved in regulating AS-related events in GLAD. Our study findings confirm that AS has a strong prognostic value for GLAD and sheds light on the clinical significance of targeting SFs in the treatment of GLAD. Portland Press Ltd. 2020-10-16 /pmc/articles/PMC7569206/ /pubmed/33000861 http://dx.doi.org/10.1042/BSR20202338 Text en © 2020 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY). |
spellingShingle | Cancer Wang, Yidi Wang, Yaxuan Li, Kenan Du, Yabing Cui, Kang Yu, Pu Zhang, Tengfei Liu, Hong Ma, Wang An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors |
title | An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors |
title_full | An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors |
title_fullStr | An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors |
title_full_unstemmed | An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors |
title_short | An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors |
title_sort | interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors |
topic | Cancer |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7569206/ https://www.ncbi.nlm.nih.gov/pubmed/33000861 http://dx.doi.org/10.1042/BSR20202338 |
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