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An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors

Alternative splicing (AS), an essential process for the maturation of mRNAs, is involved in tumorigenesis and tumor progression, including angiogenesis, apoptosis, and metastasis. AS changes can be frequently observed in different tumors, especially in geriatric lung adenocarcinoma (GLAD). Previous...

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Detalles Bibliográficos
Autores principales: Wang, Yidi, Wang, Yaxuan, Li, Kenan, Du, Yabing, Cui, Kang, Yu, Pu, Zhang, Tengfei, Liu, Hong, Ma, Wang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7569206/
https://www.ncbi.nlm.nih.gov/pubmed/33000861
http://dx.doi.org/10.1042/BSR20202338
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author Wang, Yidi
Wang, Yaxuan
Li, Kenan
Du, Yabing
Cui, Kang
Yu, Pu
Zhang, Tengfei
Liu, Hong
Ma, Wang
author_facet Wang, Yidi
Wang, Yaxuan
Li, Kenan
Du, Yabing
Cui, Kang
Yu, Pu
Zhang, Tengfei
Liu, Hong
Ma, Wang
author_sort Wang, Yidi
collection PubMed
description Alternative splicing (AS), an essential process for the maturation of mRNAs, is involved in tumorigenesis and tumor progression, including angiogenesis, apoptosis, and metastasis. AS changes can be frequently observed in different tumors, especially in geriatric lung adenocarcinoma (GLAD). Previous studies have reported an association between AS events and tumorigenesis but have lacked a systematic analysis of its underlying mechanisms. In the present study, we obtained splicing event information from SpliceSeq and clinical information regarding GLAD from The Cancer Genome Atlas. Survival-associated AS events were selected to construct eight prognostic index (PI) models. We also constructed a correlation network between splicing factors (SFs) and survival-related AS events to identify a potential molecular mechanism involved in regulating AS-related events in GLAD. Our study findings confirm that AS has a strong prognostic value for GLAD and sheds light on the clinical significance of targeting SFs in the treatment of GLAD.
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spelling pubmed-75692062020-10-23 An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors Wang, Yidi Wang, Yaxuan Li, Kenan Du, Yabing Cui, Kang Yu, Pu Zhang, Tengfei Liu, Hong Ma, Wang Biosci Rep Cancer Alternative splicing (AS), an essential process for the maturation of mRNAs, is involved in tumorigenesis and tumor progression, including angiogenesis, apoptosis, and metastasis. AS changes can be frequently observed in different tumors, especially in geriatric lung adenocarcinoma (GLAD). Previous studies have reported an association between AS events and tumorigenesis but have lacked a systematic analysis of its underlying mechanisms. In the present study, we obtained splicing event information from SpliceSeq and clinical information regarding GLAD from The Cancer Genome Atlas. Survival-associated AS events were selected to construct eight prognostic index (PI) models. We also constructed a correlation network between splicing factors (SFs) and survival-related AS events to identify a potential molecular mechanism involved in regulating AS-related events in GLAD. Our study findings confirm that AS has a strong prognostic value for GLAD and sheds light on the clinical significance of targeting SFs in the treatment of GLAD. Portland Press Ltd. 2020-10-16 /pmc/articles/PMC7569206/ /pubmed/33000861 http://dx.doi.org/10.1042/BSR20202338 Text en © 2020 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY).
spellingShingle Cancer
Wang, Yidi
Wang, Yaxuan
Li, Kenan
Du, Yabing
Cui, Kang
Yu, Pu
Zhang, Tengfei
Liu, Hong
Ma, Wang
An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
title An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
title_full An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
title_fullStr An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
title_full_unstemmed An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
title_short An interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
title_sort interactive network of alternative splicing events with prognostic value in geriatric lung adenocarcinoma via the regulation of splicing factors
topic Cancer
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7569206/
https://www.ncbi.nlm.nih.gov/pubmed/33000861
http://dx.doi.org/10.1042/BSR20202338
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