Cargando…

Whole genome sequence of Serratia marcescens 39_H1, a potential hydrolytic and acidogenic strain

Here, we report a high quality annotated draft genome of Serratia marcescens 39_H1, a Gram-negative facultative anaerobe that was isolated from an anaerobic digester. The strain exhibited hydrolytic/acidogenic properties by significantly improving methane production when used as a single isolate ino...

Descripción completa

Detalles Bibliográficos
Autores principales: Obi, Linda U., Tekere, Memory, Roopnarain, Ashira, Sanko, Tomasz, Maguvu, Tawanda E., Bezuidenhout, Cornelius C., Adeleke, Rasheed A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7569290/
https://www.ncbi.nlm.nih.gov/pubmed/33102161
http://dx.doi.org/10.1016/j.btre.2020.e00542
Descripción
Sumario:Here, we report a high quality annotated draft genome of Serratia marcescens 39_H1, a Gram-negative facultative anaerobe that was isolated from an anaerobic digester. The strain exhibited hydrolytic/acidogenic properties by significantly improving methane production when used as a single isolate inoculum during anaerobic digestion of water hyacinth and cow dung. The total genome size of the isolate was 5,106,712 bp which corresponds to an N50 of 267,528 and G + C content of 59.7 %. Genome annotation with the NCBI Prokaryotic Genome Annotation Pipeline (PGAP) predicted a total of 4,908 genes of which 4,755 were protein coding genes; there were no plasmids detected. A number of genes associated with hydrolytic/acidogenic activities as well as other metabolic activities were identified and discussed.