Cargando…

Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area

Some wild, morphologically diverse taxa of the genus Iris in the broad Alpine-Dinaric area have never been explored molecularly, and/or have ambiguous systematic status. The main aims of our research were to perform a molecular study of critical Iris taxa from that area (especially a narrow endemic...

Descripción completa

Detalles Bibliográficos
Autores principales: Weber, Tim, Jakše, Jernej, Sladonja, Barbara, Hruševar, Dario, Landeka, Nediljko, Brana, Slavko, Bohanec, Borut, Milović, Milenko, Vladović, Dalibor, Mitić, Božena, Poljuha, Danijela
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7570032/
https://www.ncbi.nlm.nih.gov/pubmed/32961899
http://dx.doi.org/10.3390/plants9091229
_version_ 1783596856075354112
author Weber, Tim
Jakše, Jernej
Sladonja, Barbara
Hruševar, Dario
Landeka, Nediljko
Brana, Slavko
Bohanec, Borut
Milović, Milenko
Vladović, Dalibor
Mitić, Božena
Poljuha, Danijela
author_facet Weber, Tim
Jakše, Jernej
Sladonja, Barbara
Hruševar, Dario
Landeka, Nediljko
Brana, Slavko
Bohanec, Borut
Milović, Milenko
Vladović, Dalibor
Mitić, Božena
Poljuha, Danijela
author_sort Weber, Tim
collection PubMed
description Some wild, morphologically diverse taxa of the genus Iris in the broad Alpine-Dinaric area have never been explored molecularly, and/or have ambiguous systematic status. The main aims of our research were to perform a molecular study of critical Iris taxa from that area (especially a narrow endemic accepted species I. adriatica, for which we also analysed genome size) and to explore the contribution of eight microsatellites and highly variable chloroplast DNA (ndhJ, rpoC1) markers to the understanding of the Iris taxa taxonomy and phylogeny. Both the microsatellite-based UPGMA and plastid markers-based maximum likelihood analysis discriminated three main clusters in the set of 32 analysed samples, which correspond well to the lower taxonomic categories of the genus, and support separate status of ambiguous regional taxa (e.g., I. sibirica subsp. erirrhiza, I. x croatica and I. x rotschildii). The first molecular data on I. adriatica revealed its genome size (2C = 12.639 ± 0.202 pg) and indicated the existence of ecotypes. For future molecular characterisation of the genus we recommend the utilisation of microsatellite markers supplemented with a combination of plastid markers.
format Online
Article
Text
id pubmed-7570032
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-75700322020-10-29 Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area Weber, Tim Jakše, Jernej Sladonja, Barbara Hruševar, Dario Landeka, Nediljko Brana, Slavko Bohanec, Borut Milović, Milenko Vladović, Dalibor Mitić, Božena Poljuha, Danijela Plants (Basel) Article Some wild, morphologically diverse taxa of the genus Iris in the broad Alpine-Dinaric area have never been explored molecularly, and/or have ambiguous systematic status. The main aims of our research were to perform a molecular study of critical Iris taxa from that area (especially a narrow endemic accepted species I. adriatica, for which we also analysed genome size) and to explore the contribution of eight microsatellites and highly variable chloroplast DNA (ndhJ, rpoC1) markers to the understanding of the Iris taxa taxonomy and phylogeny. Both the microsatellite-based UPGMA and plastid markers-based maximum likelihood analysis discriminated three main clusters in the set of 32 analysed samples, which correspond well to the lower taxonomic categories of the genus, and support separate status of ambiguous regional taxa (e.g., I. sibirica subsp. erirrhiza, I. x croatica and I. x rotschildii). The first molecular data on I. adriatica revealed its genome size (2C = 12.639 ± 0.202 pg) and indicated the existence of ecotypes. For future molecular characterisation of the genus we recommend the utilisation of microsatellite markers supplemented with a combination of plastid markers. MDPI 2020-09-18 /pmc/articles/PMC7570032/ /pubmed/32961899 http://dx.doi.org/10.3390/plants9091229 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Weber, Tim
Jakše, Jernej
Sladonja, Barbara
Hruševar, Dario
Landeka, Nediljko
Brana, Slavko
Bohanec, Borut
Milović, Milenko
Vladović, Dalibor
Mitić, Božena
Poljuha, Danijela
Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area
title Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area
title_full Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area
title_fullStr Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area
title_full_unstemmed Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area
title_short Molecular Study of Selected Taxonomically Critical Taxa of the Genus Iris L. from the Broader Alpine-Dinaric Area
title_sort molecular study of selected taxonomically critical taxa of the genus iris l. from the broader alpine-dinaric area
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7570032/
https://www.ncbi.nlm.nih.gov/pubmed/32961899
http://dx.doi.org/10.3390/plants9091229
work_keys_str_mv AT webertim molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT jaksejernej molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT sladonjabarbara molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT hrusevardario molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT landekanediljko molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT branaslavko molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT bohanecborut molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT milovicmilenko molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT vladovicdalibor molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT miticbozena molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea
AT poljuhadanijela molecularstudyofselectedtaxonomicallycriticaltaxaofthegenusirislfromthebroaderalpinedinaricarea