Cargando…

Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples

Non-target screening (NTS) based on the combination of liquid chromatography coupled to high-resolution mass spectrometry has become the key method to identify organic micro-pollutants (OMPs) in water samples. However, a large number of compounds remains unidentified with current NTS approaches due...

Descripción completa

Detalles Bibliográficos
Autores principales: Panse, Christian, Sharma, Seema, Huguet, Romain, Vughs, Dennis, Grossmann, Jonas, Brunner, Andrea Mizzi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7570901/
https://www.ncbi.nlm.nih.gov/pubmed/32932695
http://dx.doi.org/10.3390/molecules25184189
_version_ 1783597054068523008
author Panse, Christian
Sharma, Seema
Huguet, Romain
Vughs, Dennis
Grossmann, Jonas
Brunner, Andrea Mizzi
author_facet Panse, Christian
Sharma, Seema
Huguet, Romain
Vughs, Dennis
Grossmann, Jonas
Brunner, Andrea Mizzi
author_sort Panse, Christian
collection PubMed
description Non-target screening (NTS) based on the combination of liquid chromatography coupled to high-resolution mass spectrometry has become the key method to identify organic micro-pollutants (OMPs) in water samples. However, a large number of compounds remains unidentified with current NTS approaches due to poor quality fragmentation spectra generated by suboptimal fragmentation methods. Here, the potential of the alternative fragmentation technique ultraviolet photodissociation (UVPD) to improve identification of OMPs in water samples was investigated. A diverse set of water-relevant OMPs was selected based on k-means clustering and unsupervised artificial neural networks. The selected OMPs were analyzed using an Orbitrap Fusion Lumos equipped with UVPD. Therewith, information-rich MS2 fragmentation spectra of compounds that fragment poorly with higher-energy collisional dissociation (HCD) could be attained. Development of an R-based data analysis workflow and user interface facilitated the characterization and comparison of HCD and UVPD fragmentation patterns. UVPD and HCD generated both unique and common fragments, demonstrating that some fragmentation pathways are specific to the respective fragmentation method, while others seem more generic. Application of UVPD fragmentation to the analysis of surface water enabled OMP identification using existing HCD spectral libraries. However, high-throughput applications still require optimization of informatics workflows and spectral libraries tailored to UVPD.
format Online
Article
Text
id pubmed-7570901
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-75709012020-10-28 Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples Panse, Christian Sharma, Seema Huguet, Romain Vughs, Dennis Grossmann, Jonas Brunner, Andrea Mizzi Molecules Article Non-target screening (NTS) based on the combination of liquid chromatography coupled to high-resolution mass spectrometry has become the key method to identify organic micro-pollutants (OMPs) in water samples. However, a large number of compounds remains unidentified with current NTS approaches due to poor quality fragmentation spectra generated by suboptimal fragmentation methods. Here, the potential of the alternative fragmentation technique ultraviolet photodissociation (UVPD) to improve identification of OMPs in water samples was investigated. A diverse set of water-relevant OMPs was selected based on k-means clustering and unsupervised artificial neural networks. The selected OMPs were analyzed using an Orbitrap Fusion Lumos equipped with UVPD. Therewith, information-rich MS2 fragmentation spectra of compounds that fragment poorly with higher-energy collisional dissociation (HCD) could be attained. Development of an R-based data analysis workflow and user interface facilitated the characterization and comparison of HCD and UVPD fragmentation patterns. UVPD and HCD generated both unique and common fragments, demonstrating that some fragmentation pathways are specific to the respective fragmentation method, while others seem more generic. Application of UVPD fragmentation to the analysis of surface water enabled OMP identification using existing HCD spectral libraries. However, high-throughput applications still require optimization of informatics workflows and spectral libraries tailored to UVPD. MDPI 2020-09-12 /pmc/articles/PMC7570901/ /pubmed/32932695 http://dx.doi.org/10.3390/molecules25184189 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Panse, Christian
Sharma, Seema
Huguet, Romain
Vughs, Dennis
Grossmann, Jonas
Brunner, Andrea Mizzi
Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples
title Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples
title_full Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples
title_fullStr Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples
title_full_unstemmed Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples
title_short Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples
title_sort ultraviolet photodissociation for non-target screening-based identification of organic micro-pollutants in water samples
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7570901/
https://www.ncbi.nlm.nih.gov/pubmed/32932695
http://dx.doi.org/10.3390/molecules25184189
work_keys_str_mv AT pansechristian ultravioletphotodissociationfornontargetscreeningbasedidentificationoforganicmicropollutantsinwatersamples
AT sharmaseema ultravioletphotodissociationfornontargetscreeningbasedidentificationoforganicmicropollutantsinwatersamples
AT huguetromain ultravioletphotodissociationfornontargetscreeningbasedidentificationoforganicmicropollutantsinwatersamples
AT vughsdennis ultravioletphotodissociationfornontargetscreeningbasedidentificationoforganicmicropollutantsinwatersamples
AT grossmannjonas ultravioletphotodissociationfornontargetscreeningbasedidentificationoforganicmicropollutantsinwatersamples
AT brunnerandreamizzi ultravioletphotodissociationfornontargetscreeningbasedidentificationoforganicmicropollutantsinwatersamples