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Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography
Emphysema is visible on computed tomography (CT) as low-density lesions representing the destruction of the pulmonary alveoli. To train a machine learning model on the emphysema extent in CT images, labeled image data is needed. The provision of these labels requires trained readers, who are a limit...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7572947/ https://www.ncbi.nlm.nih.gov/pubmed/32779016 http://dx.doi.org/10.1007/s10278-020-00378-2 |
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author | Lidén, Mats Hjelmgren, Ola Vikgren, Jenny Thunberg, Per |
author_facet | Lidén, Mats Hjelmgren, Ola Vikgren, Jenny Thunberg, Per |
author_sort | Lidén, Mats |
collection | PubMed |
description | Emphysema is visible on computed tomography (CT) as low-density lesions representing the destruction of the pulmonary alveoli. To train a machine learning model on the emphysema extent in CT images, labeled image data is needed. The provision of these labels requires trained readers, who are a limited resource. The purpose of the study was to test the reading time, inter-observer reliability and validity of the multi-reader–multi-split method for acquiring CT image labels from radiologists. The approximately 500 slices of each stack of lung CT images were split into 1-cm chunks, with 17 thin axial slices per chunk. The chunks were randomly distributed to 26 readers, radiologists and radiology residents. Each chunk was given a quick score concerning emphysema type and severity in the left and right lung separately. A cohort of 102 subjects, with varying degrees of visible emphysema in the lung CT images, was selected from the SCAPIS pilot, performed in 2012 in Gothenburg, Sweden. In total, the readers created 9050 labels for 2881 chunks. Image labels were compared with regional annotations already provided at the SCAPIS pilot inclusion. The median reading time per chunk was 15 s. The inter-observer Krippendorff’s alpha was 0.40 and 0.53 for emphysema type and score, respectively, and higher in the apical part than in the basal part of the lungs. The multi-split emphysema scores were generally consistent with regional annotations. In conclusion, the multi-reader–multi-split method provided reasonably valid image labels, with an estimation of the inter-observer reliability. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10278-020-00378-2) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-7572947 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-75729472020-10-21 Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography Lidén, Mats Hjelmgren, Ola Vikgren, Jenny Thunberg, Per J Digit Imaging Original Paper Emphysema is visible on computed tomography (CT) as low-density lesions representing the destruction of the pulmonary alveoli. To train a machine learning model on the emphysema extent in CT images, labeled image data is needed. The provision of these labels requires trained readers, who are a limited resource. The purpose of the study was to test the reading time, inter-observer reliability and validity of the multi-reader–multi-split method for acquiring CT image labels from radiologists. The approximately 500 slices of each stack of lung CT images were split into 1-cm chunks, with 17 thin axial slices per chunk. The chunks were randomly distributed to 26 readers, radiologists and radiology residents. Each chunk was given a quick score concerning emphysema type and severity in the left and right lung separately. A cohort of 102 subjects, with varying degrees of visible emphysema in the lung CT images, was selected from the SCAPIS pilot, performed in 2012 in Gothenburg, Sweden. In total, the readers created 9050 labels for 2881 chunks. Image labels were compared with regional annotations already provided at the SCAPIS pilot inclusion. The median reading time per chunk was 15 s. The inter-observer Krippendorff’s alpha was 0.40 and 0.53 for emphysema type and score, respectively, and higher in the apical part than in the basal part of the lungs. The multi-split emphysema scores were generally consistent with regional annotations. In conclusion, the multi-reader–multi-split method provided reasonably valid image labels, with an estimation of the inter-observer reliability. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10278-020-00378-2) contains supplementary material, which is available to authorized users. Springer International Publishing 2020-08-10 2020-10 /pmc/articles/PMC7572947/ /pubmed/32779016 http://dx.doi.org/10.1007/s10278-020-00378-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Original Paper Lidén, Mats Hjelmgren, Ola Vikgren, Jenny Thunberg, Per Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography |
title | Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography |
title_full | Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography |
title_fullStr | Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography |
title_full_unstemmed | Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography |
title_short | Multi-Reader–Multi-Split Annotation of Emphysema in Computed Tomography |
title_sort | multi-reader–multi-split annotation of emphysema in computed tomography |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7572947/ https://www.ncbi.nlm.nih.gov/pubmed/32779016 http://dx.doi.org/10.1007/s10278-020-00378-2 |
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