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Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China

Bufavirus is a novel virus associated with canine gastroenteritis. Three strains of bufavirus were first detected in dog feces collected from Anhui province in Eastern China. The near-complete genome sequences were amplified. Sequence alignment showed 98.3–99.5% homology between the three bufavirus...

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Autores principales: Wang, Yong, Guo, Xu, Zhang, Da, Sun, Jianfei, Li, Wei, Fu, Ziteng, Liu, Guangqing, Li, Yongdong, Jiang, Shudong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7573632/
https://www.ncbi.nlm.nih.gov/pubmed/33091576
http://dx.doi.org/10.1016/j.meegid.2020.104600
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author Wang, Yong
Guo, Xu
Zhang, Da
Sun, Jianfei
Li, Wei
Fu, Ziteng
Liu, Guangqing
Li, Yongdong
Jiang, Shudong
author_facet Wang, Yong
Guo, Xu
Zhang, Da
Sun, Jianfei
Li, Wei
Fu, Ziteng
Liu, Guangqing
Li, Yongdong
Jiang, Shudong
author_sort Wang, Yong
collection PubMed
description Bufavirus is a novel virus associated with canine gastroenteritis. Three strains of bufavirus were first detected in dog feces collected from Anhui province in Eastern China. The near-complete genome sequences were amplified. Sequence alignment showed 98.3–99.5% homology between the three bufavirus strains and reference strains. Phylogenetic analysis showed the distributed viruses forming a cluster of close relationships. Selective pressure analysis of the VP2 region indicated that the canine bufavirus (CBuV) was mainly subject to negative selection during evolution. The negative selection site was located on the residue of B-cell epitopes, indicating minimal change to the virus's immunogenicity. Since this is the first report of CBuV circulating in Anhui Province, this study will provide further understanding of the phylogenetic and molecular characteristics of CBuV and serve as a reference for prevention and vaccine development.
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spelling pubmed-75736322020-10-20 Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China Wang, Yong Guo, Xu Zhang, Da Sun, Jianfei Li, Wei Fu, Ziteng Liu, Guangqing Li, Yongdong Jiang, Shudong Infect Genet Evol Research Paper Bufavirus is a novel virus associated with canine gastroenteritis. Three strains of bufavirus were first detected in dog feces collected from Anhui province in Eastern China. The near-complete genome sequences were amplified. Sequence alignment showed 98.3–99.5% homology between the three bufavirus strains and reference strains. Phylogenetic analysis showed the distributed viruses forming a cluster of close relationships. Selective pressure analysis of the VP2 region indicated that the canine bufavirus (CBuV) was mainly subject to negative selection during evolution. The negative selection site was located on the residue of B-cell epitopes, indicating minimal change to the virus's immunogenicity. Since this is the first report of CBuV circulating in Anhui Province, this study will provide further understanding of the phylogenetic and molecular characteristics of CBuV and serve as a reference for prevention and vaccine development. Elsevier B.V. 2020-12 2020-10-20 /pmc/articles/PMC7573632/ /pubmed/33091576 http://dx.doi.org/10.1016/j.meegid.2020.104600 Text en © 2020 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Research Paper
Wang, Yong
Guo, Xu
Zhang, Da
Sun, Jianfei
Li, Wei
Fu, Ziteng
Liu, Guangqing
Li, Yongdong
Jiang, Shudong
Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China
title Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China
title_full Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China
title_fullStr Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China
title_full_unstemmed Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China
title_short Genetic and phylogenetic analysis of canine bufavirus from Anhui Province, Eastern China
title_sort genetic and phylogenetic analysis of canine bufavirus from anhui province, eastern china
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7573632/
https://www.ncbi.nlm.nih.gov/pubmed/33091576
http://dx.doi.org/10.1016/j.meegid.2020.104600
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