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Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP

Diffusion-weighted steady-state free precession (DW-SSFP) is an SNR-efficient diffusion imaging method. The improved SNR and resolution available at ultra-high field has motivated its use at 7T. However, these data tend to have severe B(1) inhomogeneity, leading not only to spatially varying SNR, bu...

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Autores principales: Tendler, Benjamin C., Foxley, Sean, Hernandez-Fernandez, Moises, Cottaar, Michiel, Scott, Connor, Ansorge, Olaf, Miller, Karla L., Jbabdi, Saad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Academic Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7573656/
https://www.ncbi.nlm.nih.gov/pubmed/32621975
http://dx.doi.org/10.1016/j.neuroimage.2020.117113
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author Tendler, Benjamin C.
Foxley, Sean
Hernandez-Fernandez, Moises
Cottaar, Michiel
Scott, Connor
Ansorge, Olaf
Miller, Karla L.
Jbabdi, Saad
author_facet Tendler, Benjamin C.
Foxley, Sean
Hernandez-Fernandez, Moises
Cottaar, Michiel
Scott, Connor
Ansorge, Olaf
Miller, Karla L.
Jbabdi, Saad
author_sort Tendler, Benjamin C.
collection PubMed
description Diffusion-weighted steady-state free precession (DW-SSFP) is an SNR-efficient diffusion imaging method. The improved SNR and resolution available at ultra-high field has motivated its use at 7T. However, these data tend to have severe B(1) inhomogeneity, leading not only to spatially varying SNR, but also to spatially varying diffusivity estimates, confounding comparisons both between and within datasets. This study proposes the acquisition of DW-SSFP data at two-flip angles in combination with explicit modelling of non-Gaussian diffusion to address B(1) inhomogeneity at 7T. Data were acquired from five fixed whole human post-mortem brains with a pair of flip angles that jointly optimize the diffusion contrast-to-noise (CNR) across the brain. We compared one- and two-flip angle DW-SSFP data using a tensor model that incorporates the full DW-SSFP Buxton signal, in addition to tractography performed over the cingulum bundle and pre-frontal cortex using a ball & sticks model. The two-flip angle DW-SSFP data produced angular uncertainty and tractography estimates close to the CNR optimal regions in the single-flip angle datasets. The two-flip angle tensor estimates were subsequently fitted using a modified DW-SSFP signal model that incorporates a gamma distribution of diffusivities. This allowed us to generate tensor maps at a single effective b-value yielding more consistent SNR across tissue, in addition to eliminating the B(1) dependence on diffusion coefficients and orientation maps. Our proposed approach will allow the use of DW-SSFP at 7T to derive diffusivity estimates that have greater interpretability, both within a single dataset and between experiments.
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spelling pubmed-75736562020-10-23 Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP Tendler, Benjamin C. Foxley, Sean Hernandez-Fernandez, Moises Cottaar, Michiel Scott, Connor Ansorge, Olaf Miller, Karla L. Jbabdi, Saad Neuroimage Article Diffusion-weighted steady-state free precession (DW-SSFP) is an SNR-efficient diffusion imaging method. The improved SNR and resolution available at ultra-high field has motivated its use at 7T. However, these data tend to have severe B(1) inhomogeneity, leading not only to spatially varying SNR, but also to spatially varying diffusivity estimates, confounding comparisons both between and within datasets. This study proposes the acquisition of DW-SSFP data at two-flip angles in combination with explicit modelling of non-Gaussian diffusion to address B(1) inhomogeneity at 7T. Data were acquired from five fixed whole human post-mortem brains with a pair of flip angles that jointly optimize the diffusion contrast-to-noise (CNR) across the brain. We compared one- and two-flip angle DW-SSFP data using a tensor model that incorporates the full DW-SSFP Buxton signal, in addition to tractography performed over the cingulum bundle and pre-frontal cortex using a ball & sticks model. The two-flip angle DW-SSFP data produced angular uncertainty and tractography estimates close to the CNR optimal regions in the single-flip angle datasets. The two-flip angle tensor estimates were subsequently fitted using a modified DW-SSFP signal model that incorporates a gamma distribution of diffusivities. This allowed us to generate tensor maps at a single effective b-value yielding more consistent SNR across tissue, in addition to eliminating the B(1) dependence on diffusion coefficients and orientation maps. Our proposed approach will allow the use of DW-SSFP at 7T to derive diffusivity estimates that have greater interpretability, both within a single dataset and between experiments. Academic Press 2020-10-15 /pmc/articles/PMC7573656/ /pubmed/32621975 http://dx.doi.org/10.1016/j.neuroimage.2020.117113 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tendler, Benjamin C.
Foxley, Sean
Hernandez-Fernandez, Moises
Cottaar, Michiel
Scott, Connor
Ansorge, Olaf
Miller, Karla L.
Jbabdi, Saad
Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP
title Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP
title_full Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP
title_fullStr Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP
title_full_unstemmed Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP
title_short Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP
title_sort use of multi-flip angle measurements to account for transmit inhomogeneity and non-gaussian diffusion in dw-ssfp
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7573656/
https://www.ncbi.nlm.nih.gov/pubmed/32621975
http://dx.doi.org/10.1016/j.neuroimage.2020.117113
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