Cargando…

The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China

BACKGROUND: CRF_BC recombinants, including CRF07_BC and CRF08_BC, were considered the predominant subtypes in China. Since the discovery of HIV-1 circulating recombinant form CRF 85_BC in Southwest China in 2016, this BC recombinant forms had been reported in different regions of China. However, the...

Descripción completa

Detalles Bibliográficos
Autores principales: Su, Ling, Feng, Yi, Liang, Shu, Zeng, Yali, Li, Yiping, Yang, Hong, Ye, Li, Wang, Qiushi, Wei, Dongbin, Yuan, Dan, Lai, Wenhong, Zhang, Linglin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574430/
https://www.ncbi.nlm.nih.gov/pubmed/33076868
http://dx.doi.org/10.1186/s12879-020-05488-4
_version_ 1783597635404300288
author Su, Ling
Feng, Yi
Liang, Shu
Zeng, Yali
Li, Yiping
Yang, Hong
Ye, Li
Wang, Qiushi
Wei, Dongbin
Yuan, Dan
Lai, Wenhong
Zhang, Linglin
author_facet Su, Ling
Feng, Yi
Liang, Shu
Zeng, Yali
Li, Yiping
Yang, Hong
Ye, Li
Wang, Qiushi
Wei, Dongbin
Yuan, Dan
Lai, Wenhong
Zhang, Linglin
author_sort Su, Ling
collection PubMed
description BACKGROUND: CRF_BC recombinants, including CRF07_BC and CRF08_BC, were considered the predominant subtypes in China. Since the discovery of HIV-1 circulating recombinant form CRF 85_BC in Southwest China in 2016, this BC recombinant forms had been reported in different regions of China. However, the history and magnitude of CRF85_BC transmission were still to be investigated. METHOD: We conducted the most recent molecular epidemiology of HIV-1 among newly reported HIV-1 infected patients in Sichuan in 2019 by sequencing and phylogenetic analysis of 1291 pol sequences. Then, we used maximum likelihood approach and the Bayesian Markov chain Monte Carlo (MCMC) sampling of pol sequences to reconstruct the phylogeographic and demographic dynamics of the CRF85_BC. RESULTS: HIV-1 CRF85_BC (68/1291, 5.27%) became the fourth most prevalent strain revealing a significant increase in local population. CRF85_BC were only found in heterosexually infected individuals and the majority of CRF85_BC (95.45%) were circulating among the people living with HIV aged 50 years and over (PLHIV50+), suggesting a unique prevalent pattern. The founder lineages of CRF85_BC were likely to have first emerged in Yunnan, a province of Southwest China bordering Sichuan, in the early 2000s. It then spread exponentially to various places (including Guangxi, Sichuan, et al) and became endemic around 2008.6 (2006.7–2010.2) in Sichuan. CONCLUSION: Taken together, our findings on HIV-1 subtype CRF85_BC infections provided new insights into the spread of this virus and extended the understanding of the HIV epidemic in China.
format Online
Article
Text
id pubmed-7574430
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-75744302020-10-20 The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China Su, Ling Feng, Yi Liang, Shu Zeng, Yali Li, Yiping Yang, Hong Ye, Li Wang, Qiushi Wei, Dongbin Yuan, Dan Lai, Wenhong Zhang, Linglin BMC Infect Dis Research Article BACKGROUND: CRF_BC recombinants, including CRF07_BC and CRF08_BC, were considered the predominant subtypes in China. Since the discovery of HIV-1 circulating recombinant form CRF 85_BC in Southwest China in 2016, this BC recombinant forms had been reported in different regions of China. However, the history and magnitude of CRF85_BC transmission were still to be investigated. METHOD: We conducted the most recent molecular epidemiology of HIV-1 among newly reported HIV-1 infected patients in Sichuan in 2019 by sequencing and phylogenetic analysis of 1291 pol sequences. Then, we used maximum likelihood approach and the Bayesian Markov chain Monte Carlo (MCMC) sampling of pol sequences to reconstruct the phylogeographic and demographic dynamics of the CRF85_BC. RESULTS: HIV-1 CRF85_BC (68/1291, 5.27%) became the fourth most prevalent strain revealing a significant increase in local population. CRF85_BC were only found in heterosexually infected individuals and the majority of CRF85_BC (95.45%) were circulating among the people living with HIV aged 50 years and over (PLHIV50+), suggesting a unique prevalent pattern. The founder lineages of CRF85_BC were likely to have first emerged in Yunnan, a province of Southwest China bordering Sichuan, in the early 2000s. It then spread exponentially to various places (including Guangxi, Sichuan, et al) and became endemic around 2008.6 (2006.7–2010.2) in Sichuan. CONCLUSION: Taken together, our findings on HIV-1 subtype CRF85_BC infections provided new insights into the spread of this virus and extended the understanding of the HIV epidemic in China. BioMed Central 2020-10-19 /pmc/articles/PMC7574430/ /pubmed/33076868 http://dx.doi.org/10.1186/s12879-020-05488-4 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Su, Ling
Feng, Yi
Liang, Shu
Zeng, Yali
Li, Yiping
Yang, Hong
Ye, Li
Wang, Qiushi
Wei, Dongbin
Yuan, Dan
Lai, Wenhong
Zhang, Linglin
The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China
title The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China
title_full The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China
title_fullStr The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China
title_full_unstemmed The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China
title_short The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China
title_sort origin and spread of crf85_bc, driven by heterosexual transmission among older people in sichuan, china
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574430/
https://www.ncbi.nlm.nih.gov/pubmed/33076868
http://dx.doi.org/10.1186/s12879-020-05488-4
work_keys_str_mv AT suling theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT fengyi theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT liangshu theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT zengyali theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT liyiping theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT yanghong theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT yeli theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT wangqiushi theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT weidongbin theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT yuandan theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT laiwenhong theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT zhanglinglin theoriginandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT suling originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT fengyi originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT liangshu originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT zengyali originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT liyiping originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT yanghong originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT yeli originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT wangqiushi originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT weidongbin originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT yuandan originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT laiwenhong originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina
AT zhanglinglin originandspreadofcrf85bcdrivenbyheterosexualtransmissionamongolderpeopleinsichuanchina