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The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China
BACKGROUND: CRF_BC recombinants, including CRF07_BC and CRF08_BC, were considered the predominant subtypes in China. Since the discovery of HIV-1 circulating recombinant form CRF 85_BC in Southwest China in 2016, this BC recombinant forms had been reported in different regions of China. However, the...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574430/ https://www.ncbi.nlm.nih.gov/pubmed/33076868 http://dx.doi.org/10.1186/s12879-020-05488-4 |
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author | Su, Ling Feng, Yi Liang, Shu Zeng, Yali Li, Yiping Yang, Hong Ye, Li Wang, Qiushi Wei, Dongbin Yuan, Dan Lai, Wenhong Zhang, Linglin |
author_facet | Su, Ling Feng, Yi Liang, Shu Zeng, Yali Li, Yiping Yang, Hong Ye, Li Wang, Qiushi Wei, Dongbin Yuan, Dan Lai, Wenhong Zhang, Linglin |
author_sort | Su, Ling |
collection | PubMed |
description | BACKGROUND: CRF_BC recombinants, including CRF07_BC and CRF08_BC, were considered the predominant subtypes in China. Since the discovery of HIV-1 circulating recombinant form CRF 85_BC in Southwest China in 2016, this BC recombinant forms had been reported in different regions of China. However, the history and magnitude of CRF85_BC transmission were still to be investigated. METHOD: We conducted the most recent molecular epidemiology of HIV-1 among newly reported HIV-1 infected patients in Sichuan in 2019 by sequencing and phylogenetic analysis of 1291 pol sequences. Then, we used maximum likelihood approach and the Bayesian Markov chain Monte Carlo (MCMC) sampling of pol sequences to reconstruct the phylogeographic and demographic dynamics of the CRF85_BC. RESULTS: HIV-1 CRF85_BC (68/1291, 5.27%) became the fourth most prevalent strain revealing a significant increase in local population. CRF85_BC were only found in heterosexually infected individuals and the majority of CRF85_BC (95.45%) were circulating among the people living with HIV aged 50 years and over (PLHIV50+), suggesting a unique prevalent pattern. The founder lineages of CRF85_BC were likely to have first emerged in Yunnan, a province of Southwest China bordering Sichuan, in the early 2000s. It then spread exponentially to various places (including Guangxi, Sichuan, et al) and became endemic around 2008.6 (2006.7–2010.2) in Sichuan. CONCLUSION: Taken together, our findings on HIV-1 subtype CRF85_BC infections provided new insights into the spread of this virus and extended the understanding of the HIV epidemic in China. |
format | Online Article Text |
id | pubmed-7574430 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-75744302020-10-20 The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China Su, Ling Feng, Yi Liang, Shu Zeng, Yali Li, Yiping Yang, Hong Ye, Li Wang, Qiushi Wei, Dongbin Yuan, Dan Lai, Wenhong Zhang, Linglin BMC Infect Dis Research Article BACKGROUND: CRF_BC recombinants, including CRF07_BC and CRF08_BC, were considered the predominant subtypes in China. Since the discovery of HIV-1 circulating recombinant form CRF 85_BC in Southwest China in 2016, this BC recombinant forms had been reported in different regions of China. However, the history and magnitude of CRF85_BC transmission were still to be investigated. METHOD: We conducted the most recent molecular epidemiology of HIV-1 among newly reported HIV-1 infected patients in Sichuan in 2019 by sequencing and phylogenetic analysis of 1291 pol sequences. Then, we used maximum likelihood approach and the Bayesian Markov chain Monte Carlo (MCMC) sampling of pol sequences to reconstruct the phylogeographic and demographic dynamics of the CRF85_BC. RESULTS: HIV-1 CRF85_BC (68/1291, 5.27%) became the fourth most prevalent strain revealing a significant increase in local population. CRF85_BC were only found in heterosexually infected individuals and the majority of CRF85_BC (95.45%) were circulating among the people living with HIV aged 50 years and over (PLHIV50+), suggesting a unique prevalent pattern. The founder lineages of CRF85_BC were likely to have first emerged in Yunnan, a province of Southwest China bordering Sichuan, in the early 2000s. It then spread exponentially to various places (including Guangxi, Sichuan, et al) and became endemic around 2008.6 (2006.7–2010.2) in Sichuan. CONCLUSION: Taken together, our findings on HIV-1 subtype CRF85_BC infections provided new insights into the spread of this virus and extended the understanding of the HIV epidemic in China. BioMed Central 2020-10-19 /pmc/articles/PMC7574430/ /pubmed/33076868 http://dx.doi.org/10.1186/s12879-020-05488-4 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Su, Ling Feng, Yi Liang, Shu Zeng, Yali Li, Yiping Yang, Hong Ye, Li Wang, Qiushi Wei, Dongbin Yuan, Dan Lai, Wenhong Zhang, Linglin The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China |
title | The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China |
title_full | The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China |
title_fullStr | The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China |
title_full_unstemmed | The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China |
title_short | The origin and spread of CRF85_BC, driven by heterosexual transmission among older people in Sichuan, China |
title_sort | origin and spread of crf85_bc, driven by heterosexual transmission among older people in sichuan, china |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574430/ https://www.ncbi.nlm.nih.gov/pubmed/33076868 http://dx.doi.org/10.1186/s12879-020-05488-4 |
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