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Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry

OBJECTIVE: Develop an automated approach to detect flash (<1.0 s) or prolonged (>2.0 s) capillary refill time (CRT) that correlates with clinician judgment by applying several supervised machine learning (ML) techniques to pulse oximeter plethysmography data. MATERIALS AND METHODS: Data was co...

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Autores principales: Hunter, Ryan Brandon, Jiang, Shen, Nishisaki, Akira, Nickel, Amanda J., Napolitano, Natalie, Shinozaki, Koichiro, Li, Timmy, Saeki, Kota, Becker, Lance B., Nadkarni, Vinay M., Masino, Aaron J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574820/
https://www.ncbi.nlm.nih.gov/pubmed/33117190
http://dx.doi.org/10.3389/fphys.2020.564589
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author Hunter, Ryan Brandon
Jiang, Shen
Nishisaki, Akira
Nickel, Amanda J.
Napolitano, Natalie
Shinozaki, Koichiro
Li, Timmy
Saeki, Kota
Becker, Lance B.
Nadkarni, Vinay M.
Masino, Aaron J.
author_facet Hunter, Ryan Brandon
Jiang, Shen
Nishisaki, Akira
Nickel, Amanda J.
Napolitano, Natalie
Shinozaki, Koichiro
Li, Timmy
Saeki, Kota
Becker, Lance B.
Nadkarni, Vinay M.
Masino, Aaron J.
author_sort Hunter, Ryan Brandon
collection PubMed
description OBJECTIVE: Develop an automated approach to detect flash (<1.0 s) or prolonged (>2.0 s) capillary refill time (CRT) that correlates with clinician judgment by applying several supervised machine learning (ML) techniques to pulse oximeter plethysmography data. MATERIALS AND METHODS: Data was collected in the Pediatric Intensive Care Unit (ICU), Cardiac ICU, Progressive Care Unit, and Operating Suites in a large academic children’s hospital. Ninety-nine children and 30 adults were enrolled in testing and validation cohorts, respectively. Patients had 5 paired CRT measurements by a modified pulse oximeter device and a clinician, generating 485 waveform pairs for model training. Supervised ML models using gradient boosting (XGBoost), logistic regression (LR), and support vector machines (SVMs) were developed to detect flash (<1 s) or prolonged CRT (≥2 s) using clinician CRT assessment as the reference standard. Models were compared using Area Under the Receiver Operating Curve (AUC) and precision-recall curve (positive predictive value vs. sensitivity) analysis. The best performing model was externally validated with 90 measurement pairs from adult patients. Feature importance analysis was performed to identify key waveform characteristics. RESULTS: For flash CRT, XGBoost had a greater mean AUC (0.79, 95% CI 0.75–0.83) than logistic regression (0.77, 0.71–0.82) and SVM (0.72, 0.67–0.76) models. For prolonged CRT, XGBoost had a greater mean AUC (0.77, 0.72–0.82) than logistic regression (0.73, 0.68–0.78) and SVM (0.75, 0.70–0.79) models. Pairwise testing showed statistically significant improved performance comparing XGBoost and SVM; all other pairwise model comparisons did not reach statistical significance. XGBoost showed good external validation with AUC of 0.88. Feature importance analysis of XGBoost identified distinct key waveform characteristics for flash and prolonged CRT, respectively. CONCLUSION: Novel application of supervised ML to pulse oximeter waveforms yielded multiple effective models to identify flash and prolonged CRT, using clinician judgment as the reference standard. TWEET: Supervised machine learning applied to pulse oximeter waveform features predicts flash or prolonged capillary refill.
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spelling pubmed-75748202020-10-27 Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry Hunter, Ryan Brandon Jiang, Shen Nishisaki, Akira Nickel, Amanda J. Napolitano, Natalie Shinozaki, Koichiro Li, Timmy Saeki, Kota Becker, Lance B. Nadkarni, Vinay M. Masino, Aaron J. Front Physiol Physiology OBJECTIVE: Develop an automated approach to detect flash (<1.0 s) or prolonged (>2.0 s) capillary refill time (CRT) that correlates with clinician judgment by applying several supervised machine learning (ML) techniques to pulse oximeter plethysmography data. MATERIALS AND METHODS: Data was collected in the Pediatric Intensive Care Unit (ICU), Cardiac ICU, Progressive Care Unit, and Operating Suites in a large academic children’s hospital. Ninety-nine children and 30 adults were enrolled in testing and validation cohorts, respectively. Patients had 5 paired CRT measurements by a modified pulse oximeter device and a clinician, generating 485 waveform pairs for model training. Supervised ML models using gradient boosting (XGBoost), logistic regression (LR), and support vector machines (SVMs) were developed to detect flash (<1 s) or prolonged CRT (≥2 s) using clinician CRT assessment as the reference standard. Models were compared using Area Under the Receiver Operating Curve (AUC) and precision-recall curve (positive predictive value vs. sensitivity) analysis. The best performing model was externally validated with 90 measurement pairs from adult patients. Feature importance analysis was performed to identify key waveform characteristics. RESULTS: For flash CRT, XGBoost had a greater mean AUC (0.79, 95% CI 0.75–0.83) than logistic regression (0.77, 0.71–0.82) and SVM (0.72, 0.67–0.76) models. For prolonged CRT, XGBoost had a greater mean AUC (0.77, 0.72–0.82) than logistic regression (0.73, 0.68–0.78) and SVM (0.75, 0.70–0.79) models. Pairwise testing showed statistically significant improved performance comparing XGBoost and SVM; all other pairwise model comparisons did not reach statistical significance. XGBoost showed good external validation with AUC of 0.88. Feature importance analysis of XGBoost identified distinct key waveform characteristics for flash and prolonged CRT, respectively. CONCLUSION: Novel application of supervised ML to pulse oximeter waveforms yielded multiple effective models to identify flash and prolonged CRT, using clinician judgment as the reference standard. TWEET: Supervised machine learning applied to pulse oximeter waveform features predicts flash or prolonged capillary refill. Frontiers Media S.A. 2020-10-06 /pmc/articles/PMC7574820/ /pubmed/33117190 http://dx.doi.org/10.3389/fphys.2020.564589 Text en Copyright © 2020 Hunter, Jiang, Nishisaki, Nickel, Napolitano, Shinozaki, Li, Saeki, Becker, Nadkarni and Masino. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Physiology
Hunter, Ryan Brandon
Jiang, Shen
Nishisaki, Akira
Nickel, Amanda J.
Napolitano, Natalie
Shinozaki, Koichiro
Li, Timmy
Saeki, Kota
Becker, Lance B.
Nadkarni, Vinay M.
Masino, Aaron J.
Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry
title Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry
title_full Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry
title_fullStr Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry
title_full_unstemmed Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry
title_short Supervised Machine Learning Applied to Automate Flash and Prolonged Capillary Refill Detection by Pulse Oximetry
title_sort supervised machine learning applied to automate flash and prolonged capillary refill detection by pulse oximetry
topic Physiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574820/
https://www.ncbi.nlm.nih.gov/pubmed/33117190
http://dx.doi.org/10.3389/fphys.2020.564589
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