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Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19

The coronavirus disease 2019 (COVID-19) pandemic is a global public health crisis. However, little is known about the pathogenesis and biomarkers of COVID-19. Here, we profiled host responses to COVID-19 by performing plasma proteomics of a cohort of COVID-19 patients, including non-survivors and su...

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Detalles Bibliográficos
Autores principales: Shu, Ting, Ning, Wanshan, Wu, Di, Xu, Jiqian, Han, Qiangqiang, Huang, Muhan, Zou, Xiaojing, Yang, Qingyu, Yuan, Yang, Bie, Yuanyuan, Pan, Shangwen, Mu, Jingfang, Han, Yang, Yang, Xiaobo, Zhou, Hong, Li, Ruiting, Ren, Yujie, Chen, Xi, Yao, Shanglong, Qiu, Yang, Zhang, Ding-Yu, Xue, Yu, Shang, You, Zhou, Xi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574896/
https://www.ncbi.nlm.nih.gov/pubmed/33128875
http://dx.doi.org/10.1016/j.immuni.2020.10.008
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author Shu, Ting
Ning, Wanshan
Wu, Di
Xu, Jiqian
Han, Qiangqiang
Huang, Muhan
Zou, Xiaojing
Yang, Qingyu
Yuan, Yang
Bie, Yuanyuan
Pan, Shangwen
Mu, Jingfang
Han, Yang
Yang, Xiaobo
Zhou, Hong
Li, Ruiting
Ren, Yujie
Chen, Xi
Yao, Shanglong
Qiu, Yang
Zhang, Ding-Yu
Xue, Yu
Shang, You
Zhou, Xi
author_facet Shu, Ting
Ning, Wanshan
Wu, Di
Xu, Jiqian
Han, Qiangqiang
Huang, Muhan
Zou, Xiaojing
Yang, Qingyu
Yuan, Yang
Bie, Yuanyuan
Pan, Shangwen
Mu, Jingfang
Han, Yang
Yang, Xiaobo
Zhou, Hong
Li, Ruiting
Ren, Yujie
Chen, Xi
Yao, Shanglong
Qiu, Yang
Zhang, Ding-Yu
Xue, Yu
Shang, You
Zhou, Xi
author_sort Shu, Ting
collection PubMed
description The coronavirus disease 2019 (COVID-19) pandemic is a global public health crisis. However, little is known about the pathogenesis and biomarkers of COVID-19. Here, we profiled host responses to COVID-19 by performing plasma proteomics of a cohort of COVID-19 patients, including non-survivors and survivors recovered from mild or severe symptoms, and uncovered numerous COVID-19-associated alterations of plasma proteins. We developed a machine-learning-based pipeline to identify 11 proteins as biomarkers and a set of biomarker combinations, which were validated by an independent cohort and accurately distinguished and predicted COVID-19 outcomes. Some of the biomarkers were further validated by enzyme-linked immunosorbent assay (ELISA) using a larger cohort. These markedly altered proteins, including the biomarkers, mediate pathophysiological pathways, such as immune or inflammatory responses, platelet degranulation and coagulation, and metabolism, that likely contribute to the pathogenesis. Our findings provide valuable knowledge about COVID-19 biomarkers and shed light on the pathogenesis and potential therapeutic targets of COVID-19.
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spelling pubmed-75748962020-10-21 Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19 Shu, Ting Ning, Wanshan Wu, Di Xu, Jiqian Han, Qiangqiang Huang, Muhan Zou, Xiaojing Yang, Qingyu Yuan, Yang Bie, Yuanyuan Pan, Shangwen Mu, Jingfang Han, Yang Yang, Xiaobo Zhou, Hong Li, Ruiting Ren, Yujie Chen, Xi Yao, Shanglong Qiu, Yang Zhang, Ding-Yu Xue, Yu Shang, You Zhou, Xi Immunity Article The coronavirus disease 2019 (COVID-19) pandemic is a global public health crisis. However, little is known about the pathogenesis and biomarkers of COVID-19. Here, we profiled host responses to COVID-19 by performing plasma proteomics of a cohort of COVID-19 patients, including non-survivors and survivors recovered from mild or severe symptoms, and uncovered numerous COVID-19-associated alterations of plasma proteins. We developed a machine-learning-based pipeline to identify 11 proteins as biomarkers and a set of biomarker combinations, which were validated by an independent cohort and accurately distinguished and predicted COVID-19 outcomes. Some of the biomarkers were further validated by enzyme-linked immunosorbent assay (ELISA) using a larger cohort. These markedly altered proteins, including the biomarkers, mediate pathophysiological pathways, such as immune or inflammatory responses, platelet degranulation and coagulation, and metabolism, that likely contribute to the pathogenesis. Our findings provide valuable knowledge about COVID-19 biomarkers and shed light on the pathogenesis and potential therapeutic targets of COVID-19. Elsevier Inc. 2020-11-17 2020-10-20 /pmc/articles/PMC7574896/ /pubmed/33128875 http://dx.doi.org/10.1016/j.immuni.2020.10.008 Text en © 2020 Elsevier Inc. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Shu, Ting
Ning, Wanshan
Wu, Di
Xu, Jiqian
Han, Qiangqiang
Huang, Muhan
Zou, Xiaojing
Yang, Qingyu
Yuan, Yang
Bie, Yuanyuan
Pan, Shangwen
Mu, Jingfang
Han, Yang
Yang, Xiaobo
Zhou, Hong
Li, Ruiting
Ren, Yujie
Chen, Xi
Yao, Shanglong
Qiu, Yang
Zhang, Ding-Yu
Xue, Yu
Shang, You
Zhou, Xi
Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19
title Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19
title_full Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19
title_fullStr Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19
title_full_unstemmed Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19
title_short Plasma Proteomics Identify Biomarkers and Pathogenesis of COVID-19
title_sort plasma proteomics identify biomarkers and pathogenesis of covid-19
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7574896/
https://www.ncbi.nlm.nih.gov/pubmed/33128875
http://dx.doi.org/10.1016/j.immuni.2020.10.008
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