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Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines

Many animal phyla have no representatives within the catalog of whole metazoan genome sequences. This dataset fills in one gap in the genome knowledge of animal phyla with a draft genome of Bugula neritina (phylum Bryozoa). Interest in this species spans ecology and biomedical sciences because B. ne...

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Autores principales: Rayko, Mikhail, Komissarov, Aleksey, Kwan, Jason C., Lim-Fong, Grace, Rhodes, Adelaide C., Kliver, Sergey, Kuchur, Polina, O’Brien, Stephen J., Lopez, Jose V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7576161/
https://www.ncbi.nlm.nih.gov/pubmed/33082320
http://dx.doi.org/10.1038/s41597-020-00684-y
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author Rayko, Mikhail
Komissarov, Aleksey
Kwan, Jason C.
Lim-Fong, Grace
Rhodes, Adelaide C.
Kliver, Sergey
Kuchur, Polina
O’Brien, Stephen J.
Lopez, Jose V.
author_facet Rayko, Mikhail
Komissarov, Aleksey
Kwan, Jason C.
Lim-Fong, Grace
Rhodes, Adelaide C.
Kliver, Sergey
Kuchur, Polina
O’Brien, Stephen J.
Lopez, Jose V.
author_sort Rayko, Mikhail
collection PubMed
description Many animal phyla have no representatives within the catalog of whole metazoan genome sequences. This dataset fills in one gap in the genome knowledge of animal phyla with a draft genome of Bugula neritina (phylum Bryozoa). Interest in this species spans ecology and biomedical sciences because B. neritina is the natural source of bioactive compounds called bryostatins. Here we present a draft assembly of the B. neritina genome obtained from PacBio and Illumina HiSeq data, as well as genes and proteins predicted de novo and verified using transcriptome data, along with the functional annotation. These sequences will permit a better understanding of host-symbiont interactions at the genomic level, and also contribute additional phylogenomic markers to evaluate Lophophorate or Lophotrochozoa phylogenetic relationships. The effort also fits well with plans to ultimately sequence all orders of the Metazoa.
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spelling pubmed-75761612020-10-23 Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines Rayko, Mikhail Komissarov, Aleksey Kwan, Jason C. Lim-Fong, Grace Rhodes, Adelaide C. Kliver, Sergey Kuchur, Polina O’Brien, Stephen J. Lopez, Jose V. Sci Data Data Descriptor Many animal phyla have no representatives within the catalog of whole metazoan genome sequences. This dataset fills in one gap in the genome knowledge of animal phyla with a draft genome of Bugula neritina (phylum Bryozoa). Interest in this species spans ecology and biomedical sciences because B. neritina is the natural source of bioactive compounds called bryostatins. Here we present a draft assembly of the B. neritina genome obtained from PacBio and Illumina HiSeq data, as well as genes and proteins predicted de novo and verified using transcriptome data, along with the functional annotation. These sequences will permit a better understanding of host-symbiont interactions at the genomic level, and also contribute additional phylogenomic markers to evaluate Lophophorate or Lophotrochozoa phylogenetic relationships. The effort also fits well with plans to ultimately sequence all orders of the Metazoa. Nature Publishing Group UK 2020-10-20 /pmc/articles/PMC7576161/ /pubmed/33082320 http://dx.doi.org/10.1038/s41597-020-00684-y Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Rayko, Mikhail
Komissarov, Aleksey
Kwan, Jason C.
Lim-Fong, Grace
Rhodes, Adelaide C.
Kliver, Sergey
Kuchur, Polina
O’Brien, Stephen J.
Lopez, Jose V.
Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines
title Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines
title_full Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines
title_fullStr Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines
title_full_unstemmed Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines
title_short Draft genome of Bugula neritina, a colonial animal packing powerful symbionts and potential medicines
title_sort draft genome of bugula neritina, a colonial animal packing powerful symbionts and potential medicines
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7576161/
https://www.ncbi.nlm.nih.gov/pubmed/33082320
http://dx.doi.org/10.1038/s41597-020-00684-y
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