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The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4

In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to s...

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Detalles Bibliográficos
Autores principales: Jani, Jaeyres, Mustapha, Zainal Arifin, Ling, Chin Kai, Hui, Amabel Seow Ming, Teo, Roddy, Ahmed, Kamruddin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7578197/
https://www.ncbi.nlm.nih.gov/pubmed/33102655
http://dx.doi.org/10.1016/j.dib.2020.106388
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author Jani, Jaeyres
Mustapha, Zainal Arifin
Ling, Chin Kai
Hui, Amabel Seow Ming
Teo, Roddy
Ahmed, Kamruddin
author_facet Jani, Jaeyres
Mustapha, Zainal Arifin
Ling, Chin Kai
Hui, Amabel Seow Ming
Teo, Roddy
Ahmed, Kamruddin
author_sort Jani, Jaeyres
collection PubMed
description In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to sequencing using Illumina platform. M. tuberculosis strain SBH321 consists of 4,374,895 bp with G+C content of 65.59%. The comparative analysis by SNP-based phylogenetic analysis using maximum-likelihood method showed that our strain belonging to sublineage of the Ural family of Europe–America–Africa lineage (Lineage 4) and clustered with M. tuberculosis strain OFXR-4 from Taiwan. The whole genome sequence is deposited at DDBJ/ENA/GenBank under the accession WCJH00000000 (SRR10230353).
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spelling pubmed-75781972020-10-23 The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 Jani, Jaeyres Mustapha, Zainal Arifin Ling, Chin Kai Hui, Amabel Seow Ming Teo, Roddy Ahmed, Kamruddin Data Brief Data Article In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to sequencing using Illumina platform. M. tuberculosis strain SBH321 consists of 4,374,895 bp with G+C content of 65.59%. The comparative analysis by SNP-based phylogenetic analysis using maximum-likelihood method showed that our strain belonging to sublineage of the Ural family of Europe–America–Africa lineage (Lineage 4) and clustered with M. tuberculosis strain OFXR-4 from Taiwan. The whole genome sequence is deposited at DDBJ/ENA/GenBank under the accession WCJH00000000 (SRR10230353). Elsevier 2020-10-08 /pmc/articles/PMC7578197/ /pubmed/33102655 http://dx.doi.org/10.1016/j.dib.2020.106388 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Jani, Jaeyres
Mustapha, Zainal Arifin
Ling, Chin Kai
Hui, Amabel Seow Ming
Teo, Roddy
Ahmed, Kamruddin
The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4
title The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4
title_full The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4
title_fullStr The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4
title_full_unstemmed The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4
title_short The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4
title_sort whole genome sequence data analyses of a mycobacterium tuberculosis strain sbh321 isolated in sabah, malaysia, belongs to ural family of lineage 4
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7578197/
https://www.ncbi.nlm.nih.gov/pubmed/33102655
http://dx.doi.org/10.1016/j.dib.2020.106388
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