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The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4
In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to s...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7578197/ https://www.ncbi.nlm.nih.gov/pubmed/33102655 http://dx.doi.org/10.1016/j.dib.2020.106388 |
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author | Jani, Jaeyres Mustapha, Zainal Arifin Ling, Chin Kai Hui, Amabel Seow Ming Teo, Roddy Ahmed, Kamruddin |
author_facet | Jani, Jaeyres Mustapha, Zainal Arifin Ling, Chin Kai Hui, Amabel Seow Ming Teo, Roddy Ahmed, Kamruddin |
author_sort | Jani, Jaeyres |
collection | PubMed |
description | In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to sequencing using Illumina platform. M. tuberculosis strain SBH321 consists of 4,374,895 bp with G+C content of 65.59%. The comparative analysis by SNP-based phylogenetic analysis using maximum-likelihood method showed that our strain belonging to sublineage of the Ural family of Europe–America–Africa lineage (Lineage 4) and clustered with M. tuberculosis strain OFXR-4 from Taiwan. The whole genome sequence is deposited at DDBJ/ENA/GenBank under the accession WCJH00000000 (SRR10230353). |
format | Online Article Text |
id | pubmed-7578197 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-75781972020-10-23 The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 Jani, Jaeyres Mustapha, Zainal Arifin Ling, Chin Kai Hui, Amabel Seow Ming Teo, Roddy Ahmed, Kamruddin Data Brief Data Article In 2019, 10 million new cases of tuberculosis have been reported worldwide. Our data reports genetic analyses of a Mycobacterium tuberculosis strain SBH321 isolated from a 31-year-old female with pulmonary tuberculosis. The genomic DNA of the strain was extracted from pure culture and subjected to sequencing using Illumina platform. M. tuberculosis strain SBH321 consists of 4,374,895 bp with G+C content of 65.59%. The comparative analysis by SNP-based phylogenetic analysis using maximum-likelihood method showed that our strain belonging to sublineage of the Ural family of Europe–America–Africa lineage (Lineage 4) and clustered with M. tuberculosis strain OFXR-4 from Taiwan. The whole genome sequence is deposited at DDBJ/ENA/GenBank under the accession WCJH00000000 (SRR10230353). Elsevier 2020-10-08 /pmc/articles/PMC7578197/ /pubmed/33102655 http://dx.doi.org/10.1016/j.dib.2020.106388 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Jani, Jaeyres Mustapha, Zainal Arifin Ling, Chin Kai Hui, Amabel Seow Ming Teo, Roddy Ahmed, Kamruddin The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 |
title | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 |
title_full | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 |
title_fullStr | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 |
title_full_unstemmed | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 |
title_short | The whole genome sequence data analyses of a Mycobacterium tuberculosis strain SBH321 isolated in Sabah, Malaysia, belongs to Ural family of Lineage 4 |
title_sort | whole genome sequence data analyses of a mycobacterium tuberculosis strain sbh321 isolated in sabah, malaysia, belongs to ural family of lineage 4 |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7578197/ https://www.ncbi.nlm.nih.gov/pubmed/33102655 http://dx.doi.org/10.1016/j.dib.2020.106388 |
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