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Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas
BACKGROUND: Previous studies indicated a strong association between hyperkalemia and lung squamous cell carcinomas (LSCC). However, the underlying mechanism is not fully understood so far. METHODS: Literature-based data mining was conducted to identify genes, molecule, and cell processes linked to b...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7579872/ https://www.ncbi.nlm.nih.gov/pubmed/33092550 http://dx.doi.org/10.1186/s12881-020-01099-7 |
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author | Meng, Xianping Lu, Hongyan Jiang, Xia Huang, Bin Wu, Song Yu, Guiping Cao, Hongbao |
author_facet | Meng, Xianping Lu, Hongyan Jiang, Xia Huang, Bin Wu, Song Yu, Guiping Cao, Hongbao |
author_sort | Meng, Xianping |
collection | PubMed |
description | BACKGROUND: Previous studies indicated a strong association between hyperkalemia and lung squamous cell carcinomas (LSCC). However, the underlying mechanism is not fully understood so far. METHODS: Literature-based data mining was conducted to identify genes, molecule, and cell processes linked to both hyperkalemia and LSCC. Pathway analysis was performed to explore the interactive network, common-target network, and common-regulator network for both disorders. Then, a mega-analysis using 11 independent LSCC RNA expression datasets (358 LSCCs and 278 healthy controls) was performed to test the hypothesis that genes influencing hyperkalemia may also play roles in LSCC. RESULTS: There was a significant overlap between the genes implicated with both diseases (20 genes, p-value = 4.98e-15), which counts for 16% of all hyperkalemia genes (125 genes). Network analysis identified 12 molecules as common targets for hyperkalemia and LSCC, and 19 molecules as common regulators. Moreover, 19 molecules were identified within an interactive network, through which hyperkalemia and LSCC could exert influence on each other. In addition, meta-analysis identified one hyperkalemia promoter, SPP1, as a novel contributor for LSCC (LFC = 2.64; p-value = 2.81e-6). MLR analysis suggests geographical region as an influential factor for the expression levels of SPP1 in LSCC patients (p value = 0.036, 0.054). CONCLUSION: Our results showed that there was a common molecular basis for the pathology of both hyperkalemia and LSCC, and that genes promoting hyperkalemia might also play roles in the development of LSCC. However, this study did not suggest hypercalcemia as a casual factor for LSCC. |
format | Online Article Text |
id | pubmed-7579872 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-75798722020-10-22 Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas Meng, Xianping Lu, Hongyan Jiang, Xia Huang, Bin Wu, Song Yu, Guiping Cao, Hongbao BMC Med Genet Research BACKGROUND: Previous studies indicated a strong association between hyperkalemia and lung squamous cell carcinomas (LSCC). However, the underlying mechanism is not fully understood so far. METHODS: Literature-based data mining was conducted to identify genes, molecule, and cell processes linked to both hyperkalemia and LSCC. Pathway analysis was performed to explore the interactive network, common-target network, and common-regulator network for both disorders. Then, a mega-analysis using 11 independent LSCC RNA expression datasets (358 LSCCs and 278 healthy controls) was performed to test the hypothesis that genes influencing hyperkalemia may also play roles in LSCC. RESULTS: There was a significant overlap between the genes implicated with both diseases (20 genes, p-value = 4.98e-15), which counts for 16% of all hyperkalemia genes (125 genes). Network analysis identified 12 molecules as common targets for hyperkalemia and LSCC, and 19 molecules as common regulators. Moreover, 19 molecules were identified within an interactive network, through which hyperkalemia and LSCC could exert influence on each other. In addition, meta-analysis identified one hyperkalemia promoter, SPP1, as a novel contributor for LSCC (LFC = 2.64; p-value = 2.81e-6). MLR analysis suggests geographical region as an influential factor for the expression levels of SPP1 in LSCC patients (p value = 0.036, 0.054). CONCLUSION: Our results showed that there was a common molecular basis for the pathology of both hyperkalemia and LSCC, and that genes promoting hyperkalemia might also play roles in the development of LSCC. However, this study did not suggest hypercalcemia as a casual factor for LSCC. BioMed Central 2020-10-22 /pmc/articles/PMC7579872/ /pubmed/33092550 http://dx.doi.org/10.1186/s12881-020-01099-7 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Meng, Xianping Lu, Hongyan Jiang, Xia Huang, Bin Wu, Song Yu, Guiping Cao, Hongbao Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas |
title | Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas |
title_full | Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas |
title_fullStr | Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas |
title_full_unstemmed | Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas |
title_short | Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas |
title_sort | understanding the molecular association between hyperkalemia and lung squamous cell carcinomas |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7579872/ https://www.ncbi.nlm.nih.gov/pubmed/33092550 http://dx.doi.org/10.1186/s12881-020-01099-7 |
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