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Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments
This study was conducted to understand the dynamics of microbial communities of soil microorganisms, and their distribution and abundance in the indigenous microorganisms (IMOs) manipulated from humus collected from the forest near the crop field. The soil microorganisms originated from humus and ar...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7580720/ https://www.ncbi.nlm.nih.gov/pubmed/33177918 http://dx.doi.org/10.1080/12298093.2020.1816154 |
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author | Jan, Umair Feiwen, Rui Masood, Jan Chun, Se Chul |
author_facet | Jan, Umair Feiwen, Rui Masood, Jan Chun, Se Chul |
author_sort | Jan, Umair |
collection | PubMed |
description | This study was conducted to understand the dynamics of microbial communities of soil microorganisms, and their distribution and abundance in the indigenous microorganisms (IMOs) manipulated from humus collected from the forest near the crop field. The soil microorganisms originated from humus and artificially cultured microbial-based soil amendments were characterized by molecular and biochemical analyses. The bacterial population (2 × 10(6)∼13 × 10(6) CFU/g sample) was approximately 100-fold abundant than the fungal population (2 × 10(4)∼8 × 10(4) CFU/g sample). The 16S rDNA and ITS sequence analyses showed that the bacterial and fungal communities in humus and IMOs were mainly composed of Bacillus and Pseudomonas, and Trichoderma and Aspergillus species, respectively. Some of the bacterial isolates from the humus and IMOs showed strong inhibitory activity against soil-borne pathogenic fungi Fusarium oxysporum and Sclerotinia sclerotiorum. These bacteria also showed the siderophore production activity as well as phosphate solubilizing activity, which are requisite traits for biological control of plant pathogenic fungi. These results suggest that humus and IMOs could be a useful resource for sustainable agriculture. |
format | Online Article Text |
id | pubmed-7580720 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-75807202020-11-10 Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments Jan, Umair Feiwen, Rui Masood, Jan Chun, Se Chul Mycobiology Research Articles This study was conducted to understand the dynamics of microbial communities of soil microorganisms, and their distribution and abundance in the indigenous microorganisms (IMOs) manipulated from humus collected from the forest near the crop field. The soil microorganisms originated from humus and artificially cultured microbial-based soil amendments were characterized by molecular and biochemical analyses. The bacterial population (2 × 10(6)∼13 × 10(6) CFU/g sample) was approximately 100-fold abundant than the fungal population (2 × 10(4)∼8 × 10(4) CFU/g sample). The 16S rDNA and ITS sequence analyses showed that the bacterial and fungal communities in humus and IMOs were mainly composed of Bacillus and Pseudomonas, and Trichoderma and Aspergillus species, respectively. Some of the bacterial isolates from the humus and IMOs showed strong inhibitory activity against soil-borne pathogenic fungi Fusarium oxysporum and Sclerotinia sclerotiorum. These bacteria also showed the siderophore production activity as well as phosphate solubilizing activity, which are requisite traits for biological control of plant pathogenic fungi. These results suggest that humus and IMOs could be a useful resource for sustainable agriculture. Taylor & Francis 2020-09-16 /pmc/articles/PMC7580720/ /pubmed/33177918 http://dx.doi.org/10.1080/12298093.2020.1816154 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group on behalf of the Korean Society of Mycology. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Jan, Umair Feiwen, Rui Masood, Jan Chun, Se Chul Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments |
title | Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments |
title_full | Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments |
title_fullStr | Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments |
title_full_unstemmed | Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments |
title_short | Characterization of Soil Microorganism from Humus and Indigenous Microorganism Amendments |
title_sort | characterization of soil microorganism from humus and indigenous microorganism amendments |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7580720/ https://www.ncbi.nlm.nih.gov/pubmed/33177918 http://dx.doi.org/10.1080/12298093.2020.1816154 |
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