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Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study

The hemoglobin disorders are the most common single gene disorders in the world. Previous studies have suggested that they are deeply geographically structured and a variety of genetic determinants influences different clinical phenotypes between patients inheriting identical β-globin gene mutations...

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Autores principales: Barbanera, Ylenia, Arcioni, Francesco, Lancioni, Hovirag, La Starza, Roberta, Cardinali, Irene, Matteucci, Caterina, Nofrini, Valeria, Roetto, Antonella, Piga, Antonio, Grammatico, Paola, Caniglia, Maurizio, Mecucci, Cristina, Gorello, Paolo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7581000/
https://www.ncbi.nlm.nih.gov/pubmed/33091040
http://dx.doi.org/10.1371/journal.pone.0240632
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author Barbanera, Ylenia
Arcioni, Francesco
Lancioni, Hovirag
La Starza, Roberta
Cardinali, Irene
Matteucci, Caterina
Nofrini, Valeria
Roetto, Antonella
Piga, Antonio
Grammatico, Paola
Caniglia, Maurizio
Mecucci, Cristina
Gorello, Paolo
author_facet Barbanera, Ylenia
Arcioni, Francesco
Lancioni, Hovirag
La Starza, Roberta
Cardinali, Irene
Matteucci, Caterina
Nofrini, Valeria
Roetto, Antonella
Piga, Antonio
Grammatico, Paola
Caniglia, Maurizio
Mecucci, Cristina
Gorello, Paolo
author_sort Barbanera, Ylenia
collection PubMed
description The hemoglobin disorders are the most common single gene disorders in the world. Previous studies have suggested that they are deeply geographically structured and a variety of genetic determinants influences different clinical phenotypes between patients inheriting identical β-globin gene mutations. In order to get new insights into the heterogeneity of hemoglobin disorders, we investigated the molecular variations on nuclear genes (i.e. HBB, HBG2, BCL11A, HBS1L and MYB) and mitochondrial DNA control region. This pilot study was carried out on 53 patients belonging to different continents and molecularly classified in 4 subgroup: β-thalassemia (β(+)/β(+), β(0)/β(0) and β(+)/β(0))(15), sickle cell disease (HbS/HbS)(20), sickle cell/β-thalassemia (HbS/β(+) or HBS/β(0))(10), and non-thalassemic compound heterozygous (HbS/HbC, HbO-Arab/HbC)(8). This comprehensive phylogenetic analysis provided a clear separation between African and European patients either in nuclear or mitochondrial variations. Notably, informing on the phylogeographic structure of affected individuals, this accurate genetic stratification, could help to optimize the diagnostic algorithm for patients with uncertain or unknown origin.
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spelling pubmed-75810002020-10-27 Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study Barbanera, Ylenia Arcioni, Francesco Lancioni, Hovirag La Starza, Roberta Cardinali, Irene Matteucci, Caterina Nofrini, Valeria Roetto, Antonella Piga, Antonio Grammatico, Paola Caniglia, Maurizio Mecucci, Cristina Gorello, Paolo PLoS One Research Article The hemoglobin disorders are the most common single gene disorders in the world. Previous studies have suggested that they are deeply geographically structured and a variety of genetic determinants influences different clinical phenotypes between patients inheriting identical β-globin gene mutations. In order to get new insights into the heterogeneity of hemoglobin disorders, we investigated the molecular variations on nuclear genes (i.e. HBB, HBG2, BCL11A, HBS1L and MYB) and mitochondrial DNA control region. This pilot study was carried out on 53 patients belonging to different continents and molecularly classified in 4 subgroup: β-thalassemia (β(+)/β(+), β(0)/β(0) and β(+)/β(0))(15), sickle cell disease (HbS/HbS)(20), sickle cell/β-thalassemia (HbS/β(+) or HBS/β(0))(10), and non-thalassemic compound heterozygous (HbS/HbC, HbO-Arab/HbC)(8). This comprehensive phylogenetic analysis provided a clear separation between African and European patients either in nuclear or mitochondrial variations. Notably, informing on the phylogeographic structure of affected individuals, this accurate genetic stratification, could help to optimize the diagnostic algorithm for patients with uncertain or unknown origin. Public Library of Science 2020-10-22 /pmc/articles/PMC7581000/ /pubmed/33091040 http://dx.doi.org/10.1371/journal.pone.0240632 Text en © 2020 Barbanera et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Barbanera, Ylenia
Arcioni, Francesco
Lancioni, Hovirag
La Starza, Roberta
Cardinali, Irene
Matteucci, Caterina
Nofrini, Valeria
Roetto, Antonella
Piga, Antonio
Grammatico, Paola
Caniglia, Maurizio
Mecucci, Cristina
Gorello, Paolo
Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study
title Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study
title_full Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study
title_fullStr Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study
title_full_unstemmed Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study
title_short Comprehensive analysis of mitochondrial and nuclear DNA variations in patients affected by hemoglobinopathies: A pilot study
title_sort comprehensive analysis of mitochondrial and nuclear dna variations in patients affected by hemoglobinopathies: a pilot study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7581000/
https://www.ncbi.nlm.nih.gov/pubmed/33091040
http://dx.doi.org/10.1371/journal.pone.0240632
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