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A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2

The current pandemic threat of COVID‐19, caused by the novel coronavirus SARS‐CoV‐2, not only gives rise to a high number of deaths around the world but also has immense consequences for the worldwide health systems and global economy. Given the fact that this pandemic is still ongoing and there are...

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Autores principales: Battisti, Verena, Wieder, Oliver, Garon, Arthur, Seidel, Thomas, Urban, Ernst, Langer, Thierry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7583376/
https://www.ncbi.nlm.nih.gov/pubmed/32721082
http://dx.doi.org/10.1002/minf.202000090
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author Battisti, Verena
Wieder, Oliver
Garon, Arthur
Seidel, Thomas
Urban, Ernst
Langer, Thierry
author_facet Battisti, Verena
Wieder, Oliver
Garon, Arthur
Seidel, Thomas
Urban, Ernst
Langer, Thierry
author_sort Battisti, Verena
collection PubMed
description The current pandemic threat of COVID‐19, caused by the novel coronavirus SARS‐CoV‐2, not only gives rise to a high number of deaths around the world but also has immense consequences for the worldwide health systems and global economy. Given the fact that this pandemic is still ongoing and there are currently no drugs or vaccines against this novel coronavirus available, this in silico study was conducted to identify a potential novel SARS‐CoV‐2‐inhibitor. Two different approaches were pursued: 1) The Docking Consensus Approach (DCA) is a novel approach, which combines molecular dynamics simulations with molecular docking. 2) The Common Hits Approach (CHA) in contrast focuses on the combination of the feature information of pharmacophore modeling and the flexibility of molecular dynamics simulations. The application of both methods resulted in the identification of 10 compounds with high coronavirus inhibition potential.
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spelling pubmed-75833762020-10-29 A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2 Battisti, Verena Wieder, Oliver Garon, Arthur Seidel, Thomas Urban, Ernst Langer, Thierry Mol Inform Full Papers The current pandemic threat of COVID‐19, caused by the novel coronavirus SARS‐CoV‐2, not only gives rise to a high number of deaths around the world but also has immense consequences for the worldwide health systems and global economy. Given the fact that this pandemic is still ongoing and there are currently no drugs or vaccines against this novel coronavirus available, this in silico study was conducted to identify a potential novel SARS‐CoV‐2‐inhibitor. Two different approaches were pursued: 1) The Docking Consensus Approach (DCA) is a novel approach, which combines molecular dynamics simulations with molecular docking. 2) The Common Hits Approach (CHA) in contrast focuses on the combination of the feature information of pharmacophore modeling and the flexibility of molecular dynamics simulations. The application of both methods resulted in the identification of 10 compounds with high coronavirus inhibition potential. John Wiley and Sons Inc. 2020-07-28 2020-10 /pmc/articles/PMC7583376/ /pubmed/32721082 http://dx.doi.org/10.1002/minf.202000090 Text en © 2020 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Full Papers
Battisti, Verena
Wieder, Oliver
Garon, Arthur
Seidel, Thomas
Urban, Ernst
Langer, Thierry
A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2
title A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2
title_full A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2
title_fullStr A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2
title_full_unstemmed A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2
title_short A Computational Approach to Identify Potential Novel Inhibitors against the Coronavirus SARS‐CoV‐2
title_sort computational approach to identify potential novel inhibitors against the coronavirus sars‐cov‐2
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7583376/
https://www.ncbi.nlm.nih.gov/pubmed/32721082
http://dx.doi.org/10.1002/minf.202000090
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