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Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer

The tumor microenvironment is closely related to the progression and immune escape of tumor cells. Tumor-infiltrating immune cells (TIICs) and immune-related genes (IRGs) are indispensable components of the tumor microenvironment and have been demonstrated to be highly valuable in determining the pr...

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Autores principales: Zhang, Shichao, Zeng, Zhu, Liu, Yongfen, Huang, Jiangtao, Long, Jinhua, Wang, Yun, Peng, Xiaoyan, Hu, Zuquan, Ouyang, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7585095/
https://www.ncbi.nlm.nih.gov/pubmed/32969836
http://dx.doi.org/10.18632/aging.103519
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author Zhang, Shichao
Zeng, Zhu
Liu, Yongfen
Huang, Jiangtao
Long, Jinhua
Wang, Yun
Peng, Xiaoyan
Hu, Zuquan
Ouyang, Yan
author_facet Zhang, Shichao
Zeng, Zhu
Liu, Yongfen
Huang, Jiangtao
Long, Jinhua
Wang, Yun
Peng, Xiaoyan
Hu, Zuquan
Ouyang, Yan
author_sort Zhang, Shichao
collection PubMed
description The tumor microenvironment is closely related to the progression and immune escape of tumor cells. Tumor-infiltrating immune cells (TIICs) and immune-related genes (IRGs) are indispensable components of the tumor microenvironment and have been demonstrated to be highly valuable in determining the prognosis of multiple cancers. To elucidate the prognostic value of TIICs and IRGs in gastric cancer, we conducted a comprehensive analysis focusing on the abundances of 22 types of TIICs and differentially expressed IRGs based on a dataset from The Cancer Genome Atlas (TCGA). The results showed that great composition differences in TIICs and immune cell subfractions were associated with survival outcomes in different stages. Additionally, 29 hub genes were characterized from 345 differentially expressed IRGs and found to be significantly associated with survival outcomes. Then, an independent prognostic indicator based on ten IRGs was successfully constructed after multivariate adjustment for some clinical parameters. Further validation revealed that these hub IRGs could reflect the infiltration levels of immune cells. Thus, our results confirmed the clinical significance of TIICs and IRGs in gastric cancer and may establish a foundation for further exploring immune cell and gene targets for personalized treatment.
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spelling pubmed-75850952020-11-03 Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer Zhang, Shichao Zeng, Zhu Liu, Yongfen Huang, Jiangtao Long, Jinhua Wang, Yun Peng, Xiaoyan Hu, Zuquan Ouyang, Yan Aging (Albany NY) Research Paper The tumor microenvironment is closely related to the progression and immune escape of tumor cells. Tumor-infiltrating immune cells (TIICs) and immune-related genes (IRGs) are indispensable components of the tumor microenvironment and have been demonstrated to be highly valuable in determining the prognosis of multiple cancers. To elucidate the prognostic value of TIICs and IRGs in gastric cancer, we conducted a comprehensive analysis focusing on the abundances of 22 types of TIICs and differentially expressed IRGs based on a dataset from The Cancer Genome Atlas (TCGA). The results showed that great composition differences in TIICs and immune cell subfractions were associated with survival outcomes in different stages. Additionally, 29 hub genes were characterized from 345 differentially expressed IRGs and found to be significantly associated with survival outcomes. Then, an independent prognostic indicator based on ten IRGs was successfully constructed after multivariate adjustment for some clinical parameters. Further validation revealed that these hub IRGs could reflect the infiltration levels of immune cells. Thus, our results confirmed the clinical significance of TIICs and IRGs in gastric cancer and may establish a foundation for further exploring immune cell and gene targets for personalized treatment. Impact Journals 2020-09-23 /pmc/articles/PMC7585095/ /pubmed/32969836 http://dx.doi.org/10.18632/aging.103519 Text en Copyright: © 2020 Zhang et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhang, Shichao
Zeng, Zhu
Liu, Yongfen
Huang, Jiangtao
Long, Jinhua
Wang, Yun
Peng, Xiaoyan
Hu, Zuquan
Ouyang, Yan
Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer
title Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer
title_full Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer
title_fullStr Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer
title_full_unstemmed Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer
title_short Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer
title_sort prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7585095/
https://www.ncbi.nlm.nih.gov/pubmed/32969836
http://dx.doi.org/10.18632/aging.103519
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