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Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population

Objective: Our study was designed to determine if the TRPM1 gene is associated with any of three mental disorders. The project included a cross disorder meta-analysis and association analysis including 141701 cases and 175248 controls. Materials and Methods: We genotyped eight tag single nucleotide...

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Autores principales: Ma, Chuanchuan, Li, Xiuli, Chen, Jianhua, Li, Zhiqiang, Guan, Jian, Li, Yigang, Yin, Shankai, Shi, Yongyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mary Ann Liebert, Inc., publishers 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7585623/
https://www.ncbi.nlm.nih.gov/pubmed/33001715
http://dx.doi.org/10.1089/gtmb.2019.0096
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author Ma, Chuanchuan
Li, Xiuli
Chen, Jianhua
Li, Zhiqiang
Guan, Jian
Li, Yigang
Yin, Shankai
Shi, Yongyong
author_facet Ma, Chuanchuan
Li, Xiuli
Chen, Jianhua
Li, Zhiqiang
Guan, Jian
Li, Yigang
Yin, Shankai
Shi, Yongyong
author_sort Ma, Chuanchuan
collection PubMed
description Objective: Our study was designed to determine if the TRPM1 gene is associated with any of three mental disorders. The project included a cross disorder meta-analysis and association analysis including 141701 cases and 175248 controls. Materials and Methods: We genotyped eight tag single nucleotide polymorphisms (SNPs) in 1248 unrelated schizophrenia (SCZ) patients, 1056 major depressive disorder patients, 1344 bipolar disorder patients, and 1248 normal controls. We then performed a meta-analysis of 10 GWASs to identify common genetic factors among these three mental disorders. Finally, we performed a meta-analysis of six GWASs to explore the role of rs10162727 in SCZ. Result: Although two haplotypes of the TRPM1 gene, rs1035706–rs10162727 and rs10162727–rs3784599, were identified in the control group, as well as all three disease groups, none of the eight tag SNP associations remained significant after correction for multiple tests. In this cross-disorder meta-analysis of the three diseases, none of the tag SNPs were confirmed to be common among the diseases. In addition, in the meta-analysis conducted for the rs10162727 locus in SCZ, there was no significant association (p-value = 0.84, odds ratio = 1.02 [95% CI = 0.87–1.19]). Conclusion: In the Han Chinese population, no significant evidence was found linking variants of the TRPM1 gene with any of the mental disorders examined.
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spelling pubmed-75856232020-10-26 Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population Ma, Chuanchuan Li, Xiuli Chen, Jianhua Li, Zhiqiang Guan, Jian Li, Yigang Yin, Shankai Shi, Yongyong Genet Test Mol Biomarkers Original Articles Objective: Our study was designed to determine if the TRPM1 gene is associated with any of three mental disorders. The project included a cross disorder meta-analysis and association analysis including 141701 cases and 175248 controls. Materials and Methods: We genotyped eight tag single nucleotide polymorphisms (SNPs) in 1248 unrelated schizophrenia (SCZ) patients, 1056 major depressive disorder patients, 1344 bipolar disorder patients, and 1248 normal controls. We then performed a meta-analysis of 10 GWASs to identify common genetic factors among these three mental disorders. Finally, we performed a meta-analysis of six GWASs to explore the role of rs10162727 in SCZ. Result: Although two haplotypes of the TRPM1 gene, rs1035706–rs10162727 and rs10162727–rs3784599, were identified in the control group, as well as all three disease groups, none of the eight tag SNP associations remained significant after correction for multiple tests. In this cross-disorder meta-analysis of the three diseases, none of the tag SNPs were confirmed to be common among the diseases. In addition, in the meta-analysis conducted for the rs10162727 locus in SCZ, there was no significant association (p-value = 0.84, odds ratio = 1.02 [95% CI = 0.87–1.19]). Conclusion: In the Han Chinese population, no significant evidence was found linking variants of the TRPM1 gene with any of the mental disorders examined. Mary Ann Liebert, Inc., publishers 2020-10-01 2020-10-15 /pmc/articles/PMC7585623/ /pubmed/33001715 http://dx.doi.org/10.1089/gtmb.2019.0096 Text en © Chuanchuan Ma et al., 2020; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons Attribution Noncommercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and the source are cited.
spellingShingle Original Articles
Ma, Chuanchuan
Li, Xiuli
Chen, Jianhua
Li, Zhiqiang
Guan, Jian
Li, Yigang
Yin, Shankai
Shi, Yongyong
Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population
title Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population
title_full Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population
title_fullStr Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population
title_full_unstemmed Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population
title_short Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population
title_sort association analysis between common variants of the trpm1 gene and three mental disorders in the han chinese population
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7585623/
https://www.ncbi.nlm.nih.gov/pubmed/33001715
http://dx.doi.org/10.1089/gtmb.2019.0096
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