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Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia

BACKGROUND: This study describes the biodiversity and properties of Bovine leukemia virus in Western Siberia. This paper explores the effect of different genotypes of the env gene of the cattle leukemia virus on hematological parameters of infected animals. The researchers focused on exploring the p...

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Autores principales: Blazhko, Natalia, Vyshegurov, Sultan, Donchenko, Alexander, Shatokhin, Kirill, Ryabinina, Valeria, Plotnikov, Kirill, Khodakova, Alevtina, Pashkovskiy, Sergey
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7586112/
https://www.ncbi.nlm.nih.gov/pubmed/33092552
http://dx.doi.org/10.1186/s12863-020-00874-y
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author Blazhko, Natalia
Vyshegurov, Sultan
Donchenko, Alexander
Shatokhin, Kirill
Ryabinina, Valeria
Plotnikov, Kirill
Khodakova, Alevtina
Pashkovskiy, Sergey
author_facet Blazhko, Natalia
Vyshegurov, Sultan
Donchenko, Alexander
Shatokhin, Kirill
Ryabinina, Valeria
Plotnikov, Kirill
Khodakova, Alevtina
Pashkovskiy, Sergey
author_sort Blazhko, Natalia
collection PubMed
description BACKGROUND: This study describes the biodiversity and properties of Bovine leukemia virus in Western Siberia. This paper explores the effect of different genotypes of the env gene of the cattle leukemia virus on hematological parameters of infected animals. The researchers focused on exploring the polymorphism of the env gene and, in doing so, discovered the new genotypes I(a) and I(b), which differ from genotype I. Several hypotheses on the origin of the different genotypes in Siberia are discussed. RESULTS: We obtained varying length of the restriction fragments for genotypes I(.) Additionally using restrictase Hae III were received fragments was named genotype I(a), and genotype I(b). There are 2.57 ± 0.55% (20 out of 779) samples of genotype I(b) which does not differ significantly from 1% (χ(2) = 2.46). Other genotypes were observed in the cattle of Siberia as wild type genotypes (their frequency varied from 17.84 to 32.73%). The maximum viral load was observed in animals with the II and IV viral genotypes (1000–1400 viral particles per 1000 healthy cells), and the minimum viral load was observed animals with genotype I(b) (from 700 to 900 viral particles per 1000 healthy cells). CONCLUSIONS: The probability of the direct introduction of genotype II from South America to Siberia is extremely small and it is more likely that the strain originated independently in an autonomous population with its distribution also occurring independently. A new variety of genotype I (I(b)) was found, which can be both a neoplasm and a relict strain.
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spelling pubmed-75861122020-10-26 Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia Blazhko, Natalia Vyshegurov, Sultan Donchenko, Alexander Shatokhin, Kirill Ryabinina, Valeria Plotnikov, Kirill Khodakova, Alevtina Pashkovskiy, Sergey BMC Genet Research BACKGROUND: This study describes the biodiversity and properties of Bovine leukemia virus in Western Siberia. This paper explores the effect of different genotypes of the env gene of the cattle leukemia virus on hematological parameters of infected animals. The researchers focused on exploring the polymorphism of the env gene and, in doing so, discovered the new genotypes I(a) and I(b), which differ from genotype I. Several hypotheses on the origin of the different genotypes in Siberia are discussed. RESULTS: We obtained varying length of the restriction fragments for genotypes I(.) Additionally using restrictase Hae III were received fragments was named genotype I(a), and genotype I(b). There are 2.57 ± 0.55% (20 out of 779) samples of genotype I(b) which does not differ significantly from 1% (χ(2) = 2.46). Other genotypes were observed in the cattle of Siberia as wild type genotypes (their frequency varied from 17.84 to 32.73%). The maximum viral load was observed in animals with the II and IV viral genotypes (1000–1400 viral particles per 1000 healthy cells), and the minimum viral load was observed animals with genotype I(b) (from 700 to 900 viral particles per 1000 healthy cells). CONCLUSIONS: The probability of the direct introduction of genotype II from South America to Siberia is extremely small and it is more likely that the strain originated independently in an autonomous population with its distribution also occurring independently. A new variety of genotype I (I(b)) was found, which can be both a neoplasm and a relict strain. BioMed Central 2020-10-22 /pmc/articles/PMC7586112/ /pubmed/33092552 http://dx.doi.org/10.1186/s12863-020-00874-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Blazhko, Natalia
Vyshegurov, Sultan
Donchenko, Alexander
Shatokhin, Kirill
Ryabinina, Valeria
Plotnikov, Kirill
Khodakova, Alevtina
Pashkovskiy, Sergey
Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia
title Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia
title_full Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia
title_fullStr Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia
title_full_unstemmed Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia
title_short Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia
title_sort genotypes diversity of env gene of bovine leukemia virus in western siberia
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7586112/
https://www.ncbi.nlm.nih.gov/pubmed/33092552
http://dx.doi.org/10.1186/s12863-020-00874-y
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