Cargando…

Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations

Inhibition of human pancreatic lipase, a crucial enzyme in dietary fat digestion and absorption, is a potent therapeutic approach for obesity treatment. In this study, human pancreatic lipase inhibitory activity of aurone derivatives was explored by molecular modeling approaches. The target protein...

Descripción completa

Detalles Bibliográficos
Autores principales: Nguyen, Phuong Thuy Viet, Huynh, Han Ai, Truong, Dat Van, Tran, Thanh-Dao, Vo, Cam-Van Thi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7587340/
https://www.ncbi.nlm.nih.gov/pubmed/33066044
http://dx.doi.org/10.3390/molecules25204657
_version_ 1783600155449098240
author Nguyen, Phuong Thuy Viet
Huynh, Han Ai
Truong, Dat Van
Tran, Thanh-Dao
Vo, Cam-Van Thi
author_facet Nguyen, Phuong Thuy Viet
Huynh, Han Ai
Truong, Dat Van
Tran, Thanh-Dao
Vo, Cam-Van Thi
author_sort Nguyen, Phuong Thuy Viet
collection PubMed
description Inhibition of human pancreatic lipase, a crucial enzyme in dietary fat digestion and absorption, is a potent therapeutic approach for obesity treatment. In this study, human pancreatic lipase inhibitory activity of aurone derivatives was explored by molecular modeling approaches. The target protein was human pancreatic lipase (PDB ID: 1LPB). The 3D structures of 82 published bioactive aurone derivatives were docked successfully into the protein catalytic active site, using AutoDock Vina 1.5.7.rc1. Of them, 62 compounds interacted with the key residues of catalytic trial Ser152-Asp176-His263. The top hit compound (A14), with a docking score of −10.6 kcal⋅mol(−1), was subsequently submitted to molecular dynamics simulations, using GROMACS 2018.01. Molecular dynamics simulation results showed that A14 formed a stable complex with 1LPB protein via hydrogen bonds with important residues in regulating enzyme activity (Ser152 and Phe77). Compound A14 showed high potency for further studies, such as the synthesis, in vitro and in vivo tests for pancreatic lipase inhibitory activity.
format Online
Article
Text
id pubmed-7587340
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-75873402020-10-29 Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations Nguyen, Phuong Thuy Viet Huynh, Han Ai Truong, Dat Van Tran, Thanh-Dao Vo, Cam-Van Thi Molecules Article Inhibition of human pancreatic lipase, a crucial enzyme in dietary fat digestion and absorption, is a potent therapeutic approach for obesity treatment. In this study, human pancreatic lipase inhibitory activity of aurone derivatives was explored by molecular modeling approaches. The target protein was human pancreatic lipase (PDB ID: 1LPB). The 3D structures of 82 published bioactive aurone derivatives were docked successfully into the protein catalytic active site, using AutoDock Vina 1.5.7.rc1. Of them, 62 compounds interacted with the key residues of catalytic trial Ser152-Asp176-His263. The top hit compound (A14), with a docking score of −10.6 kcal⋅mol(−1), was subsequently submitted to molecular dynamics simulations, using GROMACS 2018.01. Molecular dynamics simulation results showed that A14 formed a stable complex with 1LPB protein via hydrogen bonds with important residues in regulating enzyme activity (Ser152 and Phe77). Compound A14 showed high potency for further studies, such as the synthesis, in vitro and in vivo tests for pancreatic lipase inhibitory activity. MDPI 2020-10-13 /pmc/articles/PMC7587340/ /pubmed/33066044 http://dx.doi.org/10.3390/molecules25204657 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Nguyen, Phuong Thuy Viet
Huynh, Han Ai
Truong, Dat Van
Tran, Thanh-Dao
Vo, Cam-Van Thi
Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations
title Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations
title_full Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations
title_fullStr Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations
title_full_unstemmed Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations
title_short Exploring Aurone Derivatives as Potential Human Pancreatic Lipase Inhibitors through Molecular Docking and Molecular Dynamics Simulations
title_sort exploring aurone derivatives as potential human pancreatic lipase inhibitors through molecular docking and molecular dynamics simulations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7587340/
https://www.ncbi.nlm.nih.gov/pubmed/33066044
http://dx.doi.org/10.3390/molecules25204657
work_keys_str_mv AT nguyenphuongthuyviet exploringauronederivativesaspotentialhumanpancreaticlipaseinhibitorsthroughmoleculardockingandmoleculardynamicssimulations
AT huynhhanai exploringauronederivativesaspotentialhumanpancreaticlipaseinhibitorsthroughmoleculardockingandmoleculardynamicssimulations
AT truongdatvan exploringauronederivativesaspotentialhumanpancreaticlipaseinhibitorsthroughmoleculardockingandmoleculardynamicssimulations
AT tranthanhdao exploringauronederivativesaspotentialhumanpancreaticlipaseinhibitorsthroughmoleculardockingandmoleculardynamicssimulations
AT vocamvanthi exploringauronederivativesaspotentialhumanpancreaticlipaseinhibitorsthroughmoleculardockingandmoleculardynamicssimulations