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Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification
In this study, loop-mediated isothermal amplification (LAMP) was used to establish a rapid, specific, and visual detection method for duck hepatitis B virus (DHBV). The design and synthesis of 4 specific LAMP primers were based on the conserved gene region of the DHBV genome, and the optimum tempera...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7587725/ https://www.ncbi.nlm.nih.gov/pubmed/32029161 http://dx.doi.org/10.1016/j.psj.2019.12.024 |
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author | Ji, Jun Xu, Xin Wu, Qianqian Wang, Xueyu Li, Wanyu Yao, Lunguang Kan, Yunchao Yuan, Lu Bi, Yingzuo Xie, Qingmei |
author_facet | Ji, Jun Xu, Xin Wu, Qianqian Wang, Xueyu Li, Wanyu Yao, Lunguang Kan, Yunchao Yuan, Lu Bi, Yingzuo Xie, Qingmei |
author_sort | Ji, Jun |
collection | PubMed |
description | In this study, loop-mediated isothermal amplification (LAMP) was used to establish a rapid, specific, and visual detection method for duck hepatitis B virus (DHBV). The design and synthesis of 4 specific LAMP primers were based on the conserved gene region of the DHBV genome, and the optimum temperature and time of the LAMP reaction were 63°C and 50 min, respectively. The LAMP assay was confirmed to be specific for DHBV detection and had the same sensitivity as the quantitative PCR assay. A visual detection method for rapid determination of results was developed using a color indicator containing phenol red and cresol red. A color change was produced based on a pH change in the reaction system, indicating a positive reaction. For the detection of samples from ducks and geese, the LAMP method has the advantages of simplicity, high sensitivity and specificity, good visibility, and low cost. Moreover, it is more practical and convenient than PCR-related assays for the clinical detection of DHBV. |
format | Online Article Text |
id | pubmed-7587725 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-75877252020-10-27 Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification Ji, Jun Xu, Xin Wu, Qianqian Wang, Xueyu Li, Wanyu Yao, Lunguang Kan, Yunchao Yuan, Lu Bi, Yingzuo Xie, Qingmei Poult Sci Immunology, Health and Disease In this study, loop-mediated isothermal amplification (LAMP) was used to establish a rapid, specific, and visual detection method for duck hepatitis B virus (DHBV). The design and synthesis of 4 specific LAMP primers were based on the conserved gene region of the DHBV genome, and the optimum temperature and time of the LAMP reaction were 63°C and 50 min, respectively. The LAMP assay was confirmed to be specific for DHBV detection and had the same sensitivity as the quantitative PCR assay. A visual detection method for rapid determination of results was developed using a color indicator containing phenol red and cresol red. A color change was produced based on a pH change in the reaction system, indicating a positive reaction. For the detection of samples from ducks and geese, the LAMP method has the advantages of simplicity, high sensitivity and specificity, good visibility, and low cost. Moreover, it is more practical and convenient than PCR-related assays for the clinical detection of DHBV. Elsevier 2020-01-24 /pmc/articles/PMC7587725/ /pubmed/32029161 http://dx.doi.org/10.1016/j.psj.2019.12.024 Text en © 2019 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Immunology, Health and Disease Ji, Jun Xu, Xin Wu, Qianqian Wang, Xueyu Li, Wanyu Yao, Lunguang Kan, Yunchao Yuan, Lu Bi, Yingzuo Xie, Qingmei Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification |
title | Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification |
title_full | Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification |
title_fullStr | Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification |
title_full_unstemmed | Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification |
title_short | Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification |
title_sort | simple and visible detection of duck hepatitis b virus in ducks and geese using loop-mediated isothermal amplification |
topic | Immunology, Health and Disease |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7587725/ https://www.ncbi.nlm.nih.gov/pubmed/32029161 http://dx.doi.org/10.1016/j.psj.2019.12.024 |
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