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Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification

In this study, loop-mediated isothermal amplification (LAMP) was used to establish a rapid, specific, and visual detection method for duck hepatitis B virus (DHBV). The design and synthesis of 4 specific LAMP primers were based on the conserved gene region of the DHBV genome, and the optimum tempera...

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Autores principales: Ji, Jun, Xu, Xin, Wu, Qianqian, Wang, Xueyu, Li, Wanyu, Yao, Lunguang, Kan, Yunchao, Yuan, Lu, Bi, Yingzuo, Xie, Qingmei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7587725/
https://www.ncbi.nlm.nih.gov/pubmed/32029161
http://dx.doi.org/10.1016/j.psj.2019.12.024
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author Ji, Jun
Xu, Xin
Wu, Qianqian
Wang, Xueyu
Li, Wanyu
Yao, Lunguang
Kan, Yunchao
Yuan, Lu
Bi, Yingzuo
Xie, Qingmei
author_facet Ji, Jun
Xu, Xin
Wu, Qianqian
Wang, Xueyu
Li, Wanyu
Yao, Lunguang
Kan, Yunchao
Yuan, Lu
Bi, Yingzuo
Xie, Qingmei
author_sort Ji, Jun
collection PubMed
description In this study, loop-mediated isothermal amplification (LAMP) was used to establish a rapid, specific, and visual detection method for duck hepatitis B virus (DHBV). The design and synthesis of 4 specific LAMP primers were based on the conserved gene region of the DHBV genome, and the optimum temperature and time of the LAMP reaction were 63°C and 50 min, respectively. The LAMP assay was confirmed to be specific for DHBV detection and had the same sensitivity as the quantitative PCR assay. A visual detection method for rapid determination of results was developed using a color indicator containing phenol red and cresol red. A color change was produced based on a pH change in the reaction system, indicating a positive reaction. For the detection of samples from ducks and geese, the LAMP method has the advantages of simplicity, high sensitivity and specificity, good visibility, and low cost. Moreover, it is more practical and convenient than PCR-related assays for the clinical detection of DHBV.
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spelling pubmed-75877252020-10-27 Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification Ji, Jun Xu, Xin Wu, Qianqian Wang, Xueyu Li, Wanyu Yao, Lunguang Kan, Yunchao Yuan, Lu Bi, Yingzuo Xie, Qingmei Poult Sci Immunology, Health and Disease In this study, loop-mediated isothermal amplification (LAMP) was used to establish a rapid, specific, and visual detection method for duck hepatitis B virus (DHBV). The design and synthesis of 4 specific LAMP primers were based on the conserved gene region of the DHBV genome, and the optimum temperature and time of the LAMP reaction were 63°C and 50 min, respectively. The LAMP assay was confirmed to be specific for DHBV detection and had the same sensitivity as the quantitative PCR assay. A visual detection method for rapid determination of results was developed using a color indicator containing phenol red and cresol red. A color change was produced based on a pH change in the reaction system, indicating a positive reaction. For the detection of samples from ducks and geese, the LAMP method has the advantages of simplicity, high sensitivity and specificity, good visibility, and low cost. Moreover, it is more practical and convenient than PCR-related assays for the clinical detection of DHBV. Elsevier 2020-01-24 /pmc/articles/PMC7587725/ /pubmed/32029161 http://dx.doi.org/10.1016/j.psj.2019.12.024 Text en © 2019 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Immunology, Health and Disease
Ji, Jun
Xu, Xin
Wu, Qianqian
Wang, Xueyu
Li, Wanyu
Yao, Lunguang
Kan, Yunchao
Yuan, Lu
Bi, Yingzuo
Xie, Qingmei
Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification
title Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification
title_full Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification
title_fullStr Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification
title_full_unstemmed Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification
title_short Simple and visible detection of duck hepatitis B virus in ducks and geese using loop-mediated isothermal amplification
title_sort simple and visible detection of duck hepatitis b virus in ducks and geese using loop-mediated isothermal amplification
topic Immunology, Health and Disease
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7587725/
https://www.ncbi.nlm.nih.gov/pubmed/32029161
http://dx.doi.org/10.1016/j.psj.2019.12.024
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