Cargando…
Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum
Sorghum (Sorghum bicolor (L.)) Moench is an important food for humans and feed for livestock. Sorghum contains dhurrin which can be degraded into toxic hydrogen cyanide. Here, we report the expression patterns of 14 candidate genes related to dhurrin ((S)-4-Hydroxymandelnitrile-β-D-glucopyranoside)...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7589853/ https://www.ncbi.nlm.nih.gov/pubmed/33086681 http://dx.doi.org/10.3390/plants9101390 |
_version_ | 1783600674528821248 |
---|---|
author | Choi, Sang Chul Chung, Yong Suk Lee, Yun Gyeong Kang, Yuna Park, Yun Ji Park, Sang Un Kim, Changsoo |
author_facet | Choi, Sang Chul Chung, Yong Suk Lee, Yun Gyeong Kang, Yuna Park, Yun Ji Park, Sang Un Kim, Changsoo |
author_sort | Choi, Sang Chul |
collection | PubMed |
description | Sorghum (Sorghum bicolor (L.)) Moench is an important food for humans and feed for livestock. Sorghum contains dhurrin which can be degraded into toxic hydrogen cyanide. Here, we report the expression patterns of 14 candidate genes related to dhurrin ((S)-4-Hydroxymandelnitrile-β-D-glucopyranoside) metabolism and the effects of the gene expression on specific metabolite content in selected sorghum accessions. Dhurrin-related metabolism is vigorous in the early stages of development of sorghum. The dhurrin contents of most accessions tested were in the range of approximately 6–22 μg mg(−1) fresh leaf tissue throughout growth. The p-hydroxybenzaldehyde (pHB) contents were high at seedling stages, but almost nonexistent at adult stages. The contents of p-hydroxyphenylacetic acid (pHPAAc) were relatively low throughout growth compared to those of dhurrin or pHB. Generally, the expression of the candidate genes was higher at seedling stage than at other stages and decreased gradually as plants grew. In addition, we identified significant SNPs, and six of them were potentially associated with non-synonymous changes in CAS1. Our results may provide the basis for choosing breeding materials to regulate cyanide contents in sorghum varieties to prevent HCN toxicity of livestock or to promote drought tolerance or pathogen resistance. |
format | Online Article Text |
id | pubmed-7589853 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-75898532020-10-29 Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum Choi, Sang Chul Chung, Yong Suk Lee, Yun Gyeong Kang, Yuna Park, Yun Ji Park, Sang Un Kim, Changsoo Plants (Basel) Article Sorghum (Sorghum bicolor (L.)) Moench is an important food for humans and feed for livestock. Sorghum contains dhurrin which can be degraded into toxic hydrogen cyanide. Here, we report the expression patterns of 14 candidate genes related to dhurrin ((S)-4-Hydroxymandelnitrile-β-D-glucopyranoside) metabolism and the effects of the gene expression on specific metabolite content in selected sorghum accessions. Dhurrin-related metabolism is vigorous in the early stages of development of sorghum. The dhurrin contents of most accessions tested were in the range of approximately 6–22 μg mg(−1) fresh leaf tissue throughout growth. The p-hydroxybenzaldehyde (pHB) contents were high at seedling stages, but almost nonexistent at adult stages. The contents of p-hydroxyphenylacetic acid (pHPAAc) were relatively low throughout growth compared to those of dhurrin or pHB. Generally, the expression of the candidate genes was higher at seedling stage than at other stages and decreased gradually as plants grew. In addition, we identified significant SNPs, and six of them were potentially associated with non-synonymous changes in CAS1. Our results may provide the basis for choosing breeding materials to regulate cyanide contents in sorghum varieties to prevent HCN toxicity of livestock or to promote drought tolerance or pathogen resistance. MDPI 2020-10-19 /pmc/articles/PMC7589853/ /pubmed/33086681 http://dx.doi.org/10.3390/plants9101390 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Choi, Sang Chul Chung, Yong Suk Lee, Yun Gyeong Kang, Yuna Park, Yun Ji Park, Sang Un Kim, Changsoo Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum |
title | Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum |
title_full | Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum |
title_fullStr | Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum |
title_full_unstemmed | Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum |
title_short | Prediction of Dhurrin Metabolism by Transcriptome and Metabolome Analyses in Sorghum |
title_sort | prediction of dhurrin metabolism by transcriptome and metabolome analyses in sorghum |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7589853/ https://www.ncbi.nlm.nih.gov/pubmed/33086681 http://dx.doi.org/10.3390/plants9101390 |
work_keys_str_mv | AT choisangchul predictionofdhurrinmetabolismbytranscriptomeandmetabolomeanalysesinsorghum AT chungyongsuk predictionofdhurrinmetabolismbytranscriptomeandmetabolomeanalysesinsorghum AT leeyungyeong predictionofdhurrinmetabolismbytranscriptomeandmetabolomeanalysesinsorghum AT kangyuna predictionofdhurrinmetabolismbytranscriptomeandmetabolomeanalysesinsorghum AT parkyunji predictionofdhurrinmetabolismbytranscriptomeandmetabolomeanalysesinsorghum AT parksangun predictionofdhurrinmetabolismbytranscriptomeandmetabolomeanalysesinsorghum AT kimchangsoo predictionofdhurrinmetabolismbytranscriptomeandmetabolomeanalysesinsorghum |