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Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem

Agroecosystem conditions limit the productivity of lowbush blueberry. Our objectives were to investigate the effects on berry yield of agroecosystem and crop management variables, then to develop a recommendation system to adjust nutrient and soil management of lowbush blueberry to given local meteo...

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Autores principales: Parent, Serge-Étienne, Lafond, Jean, Paré, Maxime C., Parent, Léon Etienne, Ziadi, Noura
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7589862/
https://www.ncbi.nlm.nih.gov/pubmed/33096712
http://dx.doi.org/10.3390/plants9101401
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author Parent, Serge-Étienne
Lafond, Jean
Paré, Maxime C.
Parent, Léon Etienne
Ziadi, Noura
author_facet Parent, Serge-Étienne
Lafond, Jean
Paré, Maxime C.
Parent, Léon Etienne
Ziadi, Noura
author_sort Parent, Serge-Étienne
collection PubMed
description Agroecosystem conditions limit the productivity of lowbush blueberry. Our objectives were to investigate the effects on berry yield of agroecosystem and crop management variables, then to develop a recommendation system to adjust nutrient and soil management of lowbush blueberry to given local meteorological conditions. We collected 1504 observations from N-P-K fertilizer trials conducted in Quebec, Canada. The data set, that comprised soil, tissue, and meteorological data, was processed by Bayesian mixed models, machine learning, compositional data analysis, and Markov chains. Our investigative statistical models showed that meteorological indices had the greatest impact on yield. High mean temperature at flower bud opening and after fruit maturation, and total precipitation at flowering stage showed positive effects. Low mean temperature and low total precipitation before bud opening, at flowering, and by fruit maturity, as well as number of freezing days (<−5 °C) before flower bud opening, showed negative effects. Soil and tissue tests, and N-P-K fertilization showed smaller effects. Gaussian processes predicted yields from historical weather data, soil test, fertilizer dosage, and tissue test with a root-mean-square-error of 1447 kg ha(−1). An in-house Markov chain algorithm optimized yields modelled by Gaussian processes from tissue test, soil test, and fertilizer dosage as conditioned to specified historical meteorological features, potentially increasing yield by a median factor of 1.5. Machine learning, compositional data analysis, and Markov chains allowed customizing nutrient management of lowbush blueberry at local scale.
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spelling pubmed-75898622020-10-29 Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem Parent, Serge-Étienne Lafond, Jean Paré, Maxime C. Parent, Léon Etienne Ziadi, Noura Plants (Basel) Article Agroecosystem conditions limit the productivity of lowbush blueberry. Our objectives were to investigate the effects on berry yield of agroecosystem and crop management variables, then to develop a recommendation system to adjust nutrient and soil management of lowbush blueberry to given local meteorological conditions. We collected 1504 observations from N-P-K fertilizer trials conducted in Quebec, Canada. The data set, that comprised soil, tissue, and meteorological data, was processed by Bayesian mixed models, machine learning, compositional data analysis, and Markov chains. Our investigative statistical models showed that meteorological indices had the greatest impact on yield. High mean temperature at flower bud opening and after fruit maturation, and total precipitation at flowering stage showed positive effects. Low mean temperature and low total precipitation before bud opening, at flowering, and by fruit maturity, as well as number of freezing days (<−5 °C) before flower bud opening, showed negative effects. Soil and tissue tests, and N-P-K fertilization showed smaller effects. Gaussian processes predicted yields from historical weather data, soil test, fertilizer dosage, and tissue test with a root-mean-square-error of 1447 kg ha(−1). An in-house Markov chain algorithm optimized yields modelled by Gaussian processes from tissue test, soil test, and fertilizer dosage as conditioned to specified historical meteorological features, potentially increasing yield by a median factor of 1.5. Machine learning, compositional data analysis, and Markov chains allowed customizing nutrient management of lowbush blueberry at local scale. MDPI 2020-10-21 /pmc/articles/PMC7589862/ /pubmed/33096712 http://dx.doi.org/10.3390/plants9101401 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Parent, Serge-Étienne
Lafond, Jean
Paré, Maxime C.
Parent, Léon Etienne
Ziadi, Noura
Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem
title Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem
title_full Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem
title_fullStr Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem
title_full_unstemmed Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem
title_short Conditioning Machine Learning Models to Adjust Lowbush Blueberry Crop Management to the Local Agroecosystem
title_sort conditioning machine learning models to adjust lowbush blueberry crop management to the local agroecosystem
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7589862/
https://www.ncbi.nlm.nih.gov/pubmed/33096712
http://dx.doi.org/10.3390/plants9101401
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