Cargando…

Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT

BACKGROUND: The development of multicenter patient registries promotes the generation of scientific knowledge by using real-world data. A country-wide, web-based registry for inherited retinal dystrophies (IRDs) empowers patients and community organizations, while supporting formal partnerships rese...

Descripción completa

Detalles Bibliográficos
Autores principales: Marques, João Pedro, Carvalho, Ana Luísa, Henriques, José, Murta, Joaquim Neto, Saraiva, Jorge, Silva, Rufino
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7590677/
https://www.ncbi.nlm.nih.gov/pubmed/33109251
http://dx.doi.org/10.1186/s13023-020-01591-6
_version_ 1783600850872041472
author Marques, João Pedro
Carvalho, Ana Luísa
Henriques, José
Murta, Joaquim Neto
Saraiva, Jorge
Silva, Rufino
author_facet Marques, João Pedro
Carvalho, Ana Luísa
Henriques, José
Murta, Joaquim Neto
Saraiva, Jorge
Silva, Rufino
author_sort Marques, João Pedro
collection PubMed
description BACKGROUND: The development of multicenter patient registries promotes the generation of scientific knowledge by using real-world data. A country-wide, web-based registry for inherited retinal dystrophies (IRDs) empowers patients and community organizations, while supporting formal partnerships research. We aim to describe the design, development and deployment of a country-wide, with investigators and stakeholders in the global aim to develop high-value, high-utility web-based, user-friendly and interoperable registry for IRDs—the IRD-PT. RESULTS: The IRD-PT is a clinical/genetic research registry included in the retina.pt platform (https://www.retina.com.pt), which was developed by the Portuguese Retina Study Group. The retina.pt platform collects data on individuals diagnosed with retinal diseases, from several sites across Portugal, with over 1800 participants and over 30,000 consultations to date. The IRD-PT module interacts with the retina.pt core system which provides a range of basic functions for patient data management, while the IRD-PT module allows data capture for the specific purpose of IRDs. All IRDs are coded accordingly to the International Statistical Classification of Diseases and Related Health Problems (ICD) 9, ICD 10, ICD 11, and Orphanet Rare Disease Ontology (ORPHA codes) to make the IRD-PT interoperable with other IRD registries across the world. Furthermore, the genes are coded according to the Ontology of Genes and Genomes and Online Mendelian Inheritance in Man, whereas signs and symptoms are coded according to the Human Phenotype Ontology. The IRD-PT module pre-launched at Centro Hospitalar e Universitário de Coimbra, the largest reference center for IRDs in Portugal. As of April 1st 2020, finalized data from 537 participants were available for this preliminary analysis. CONCLUSIONS: In the specific field of rare diseases, the use of registries increases research accessibility for individuals, while providing clinicians/investigators with a coherent data ecosystem necessary to boost research. Appropriate design and implementation of patient registries enables rapid decision making and ongoing data mining, ultimately leading to improved patient outcomes. We have described here the principles behind the design, development and deployment of a web-based, user-friendly and interoperable software tool aimed to generate important knowledge and collecting high-quality data on the epidemiology, genomic landscape and natural history of IRDs in Portugal.
format Online
Article
Text
id pubmed-7590677
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-75906772020-10-27 Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT Marques, João Pedro Carvalho, Ana Luísa Henriques, José Murta, Joaquim Neto Saraiva, Jorge Silva, Rufino Orphanet J Rare Dis Research BACKGROUND: The development of multicenter patient registries promotes the generation of scientific knowledge by using real-world data. A country-wide, web-based registry for inherited retinal dystrophies (IRDs) empowers patients and community organizations, while supporting formal partnerships research. We aim to describe the design, development and deployment of a country-wide, with investigators and stakeholders in the global aim to develop high-value, high-utility web-based, user-friendly and interoperable registry for IRDs—the IRD-PT. RESULTS: The IRD-PT is a clinical/genetic research registry included in the retina.pt platform (https://www.retina.com.pt), which was developed by the Portuguese Retina Study Group. The retina.pt platform collects data on individuals diagnosed with retinal diseases, from several sites across Portugal, with over 1800 participants and over 30,000 consultations to date. The IRD-PT module interacts with the retina.pt core system which provides a range of basic functions for patient data management, while the IRD-PT module allows data capture for the specific purpose of IRDs. All IRDs are coded accordingly to the International Statistical Classification of Diseases and Related Health Problems (ICD) 9, ICD 10, ICD 11, and Orphanet Rare Disease Ontology (ORPHA codes) to make the IRD-PT interoperable with other IRD registries across the world. Furthermore, the genes are coded according to the Ontology of Genes and Genomes and Online Mendelian Inheritance in Man, whereas signs and symptoms are coded according to the Human Phenotype Ontology. The IRD-PT module pre-launched at Centro Hospitalar e Universitário de Coimbra, the largest reference center for IRDs in Portugal. As of April 1st 2020, finalized data from 537 participants were available for this preliminary analysis. CONCLUSIONS: In the specific field of rare diseases, the use of registries increases research accessibility for individuals, while providing clinicians/investigators with a coherent data ecosystem necessary to boost research. Appropriate design and implementation of patient registries enables rapid decision making and ongoing data mining, ultimately leading to improved patient outcomes. We have described here the principles behind the design, development and deployment of a web-based, user-friendly and interoperable software tool aimed to generate important knowledge and collecting high-quality data on the epidemiology, genomic landscape and natural history of IRDs in Portugal. BioMed Central 2020-10-27 /pmc/articles/PMC7590677/ /pubmed/33109251 http://dx.doi.org/10.1186/s13023-020-01591-6 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Marques, João Pedro
Carvalho, Ana Luísa
Henriques, José
Murta, Joaquim Neto
Saraiva, Jorge
Silva, Rufino
Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT
title Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT
title_full Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT
title_fullStr Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT
title_full_unstemmed Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT
title_short Design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in Portugal: the IRD-PT
title_sort design, development and deployment of a web-based interoperable registry for inherited retinal dystrophies in portugal: the ird-pt
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7590677/
https://www.ncbi.nlm.nih.gov/pubmed/33109251
http://dx.doi.org/10.1186/s13023-020-01591-6
work_keys_str_mv AT marquesjoaopedro designdevelopmentanddeploymentofawebbasedinteroperableregistryforinheritedretinaldystrophiesinportugaltheirdpt
AT carvalhoanaluisa designdevelopmentanddeploymentofawebbasedinteroperableregistryforinheritedretinaldystrophiesinportugaltheirdpt
AT henriquesjose designdevelopmentanddeploymentofawebbasedinteroperableregistryforinheritedretinaldystrophiesinportugaltheirdpt
AT murtajoaquimneto designdevelopmentanddeploymentofawebbasedinteroperableregistryforinheritedretinaldystrophiesinportugaltheirdpt
AT saraivajorge designdevelopmentanddeploymentofawebbasedinteroperableregistryforinheritedretinaldystrophiesinportugaltheirdpt
AT silvarufino designdevelopmentanddeploymentofawebbasedinteroperableregistryforinheritedretinaldystrophiesinportugaltheirdpt