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TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases

Tzanck smear test is a low-cost, rapid and reliable tool which can be used for the diagnosis of many erosive-vesiculobullous, tumoral and granulomatous diseases. Currently its use is limited mainly due to lack of experience in interpretation of the smears. We developed a deep learning model, TzanckN...

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Autores principales: Noyan, Mehmet Alican, Durdu, Murat, Eskiocak, Ali Haydar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7591506/
https://www.ncbi.nlm.nih.gov/pubmed/33110197
http://dx.doi.org/10.1038/s41598-020-75546-z
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author Noyan, Mehmet Alican
Durdu, Murat
Eskiocak, Ali Haydar
author_facet Noyan, Mehmet Alican
Durdu, Murat
Eskiocak, Ali Haydar
author_sort Noyan, Mehmet Alican
collection PubMed
description Tzanck smear test is a low-cost, rapid and reliable tool which can be used for the diagnosis of many erosive-vesiculobullous, tumoral and granulomatous diseases. Currently its use is limited mainly due to lack of experience in interpretation of the smears. We developed a deep learning model, TzanckNet, that can identify cells in Tzanck smear test findings. TzanckNet was trained on a retrospective development dataset of 2260 Tzanck smear images collected between December 2006 and December 2019. The finalized model was evaluated using a prospective validation dataset of 359 Tzanck smear images collected from 15 patients during January 2020. It is designed to recognize six cell types (acantholytic cells, eosinophils, hypha, multinucleated giant cells, normal keratinocytes and tadpole cells). For 359 images and 6 cell types, TzanckNet made 2154 predictions. The accuracy was 94.3% (95% CI 93.4–95.3), the sensitivity was 83.7% (95% CI 80.3–87.0) and the specificity was 97.3% (95% CI 96.5–98.1). The area under the receiver operating characteristic curve was 0.974. Our results show that TzanckNet has the potential to lower the experience barrier needed to use this test, broadening its user base, and hence improving patient well-being.
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spelling pubmed-75915062020-10-28 TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases Noyan, Mehmet Alican Durdu, Murat Eskiocak, Ali Haydar Sci Rep Article Tzanck smear test is a low-cost, rapid and reliable tool which can be used for the diagnosis of many erosive-vesiculobullous, tumoral and granulomatous diseases. Currently its use is limited mainly due to lack of experience in interpretation of the smears. We developed a deep learning model, TzanckNet, that can identify cells in Tzanck smear test findings. TzanckNet was trained on a retrospective development dataset of 2260 Tzanck smear images collected between December 2006 and December 2019. The finalized model was evaluated using a prospective validation dataset of 359 Tzanck smear images collected from 15 patients during January 2020. It is designed to recognize six cell types (acantholytic cells, eosinophils, hypha, multinucleated giant cells, normal keratinocytes and tadpole cells). For 359 images and 6 cell types, TzanckNet made 2154 predictions. The accuracy was 94.3% (95% CI 93.4–95.3), the sensitivity was 83.7% (95% CI 80.3–87.0) and the specificity was 97.3% (95% CI 96.5–98.1). The area under the receiver operating characteristic curve was 0.974. Our results show that TzanckNet has the potential to lower the experience barrier needed to use this test, broadening its user base, and hence improving patient well-being. Nature Publishing Group UK 2020-10-27 /pmc/articles/PMC7591506/ /pubmed/33110197 http://dx.doi.org/10.1038/s41598-020-75546-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Noyan, Mehmet Alican
Durdu, Murat
Eskiocak, Ali Haydar
TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases
title TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases
title_full TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases
title_fullStr TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases
title_full_unstemmed TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases
title_short TzanckNet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases
title_sort tzancknet: a convolutional neural network to identify cells in the cytology of erosive-vesiculobullous diseases
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7591506/
https://www.ncbi.nlm.nih.gov/pubmed/33110197
http://dx.doi.org/10.1038/s41598-020-75546-z
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