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Experimental determination of evolutionary barriers to horizontal gene transfer

BACKGROUND: Horizontal gene transfer, the acquisition of genes across species boundaries, is a major source of novel phenotypes that enables microbes to rapidly adapt to new environments. How the transferred gene alters the growth – fitness – of the new host affects the success of the horizontal gen...

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Autores principales: Acar Kirit, Hande, Lagator, Mato, Bollback, Jonathan P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7592521/
https://www.ncbi.nlm.nih.gov/pubmed/33115402
http://dx.doi.org/10.1186/s12866-020-01983-5
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author Acar Kirit, Hande
Lagator, Mato
Bollback, Jonathan P.
author_facet Acar Kirit, Hande
Lagator, Mato
Bollback, Jonathan P.
author_sort Acar Kirit, Hande
collection PubMed
description BACKGROUND: Horizontal gene transfer, the acquisition of genes across species boundaries, is a major source of novel phenotypes that enables microbes to rapidly adapt to new environments. How the transferred gene alters the growth – fitness – of the new host affects the success of the horizontal gene transfer event and how rapidly the gene spreads in the population. Several selective barriers – factors that impact the fitness effect of the transferred gene – have been suggested to impede the likelihood of horizontal transmission, however experimental evidence is scarce. The objective of this study was to determine the fitness effects of orthologous genes transferred from Salmonella enterica serovar Typhimurium to Escherichia coli to identify the selective barriers using highly precise experimental measurements. RESULTS: We found that most gene transfers result in strong fitness costs. Previously identified evolutionary barriers — gene function and the number of protein-protein interactions — did not predict the fitness effects of transferred genes. In contrast, dosage sensitivity, gene length, and the intrinsic protein disorder significantly impact the likelihood of a successful horizontal transfer. CONCLUSION: While computational approaches have been successful in describing long-term barriers to horizontal gene transfer, our experimental results identified previously underappreciated barriers that determine the fitness effects of newly transferred genes, and hence their short-term eco-evolutionary dynamics.
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spelling pubmed-75925212020-10-29 Experimental determination of evolutionary barriers to horizontal gene transfer Acar Kirit, Hande Lagator, Mato Bollback, Jonathan P. BMC Microbiol Research Article BACKGROUND: Horizontal gene transfer, the acquisition of genes across species boundaries, is a major source of novel phenotypes that enables microbes to rapidly adapt to new environments. How the transferred gene alters the growth – fitness – of the new host affects the success of the horizontal gene transfer event and how rapidly the gene spreads in the population. Several selective barriers – factors that impact the fitness effect of the transferred gene – have been suggested to impede the likelihood of horizontal transmission, however experimental evidence is scarce. The objective of this study was to determine the fitness effects of orthologous genes transferred from Salmonella enterica serovar Typhimurium to Escherichia coli to identify the selective barriers using highly precise experimental measurements. RESULTS: We found that most gene transfers result in strong fitness costs. Previously identified evolutionary barriers — gene function and the number of protein-protein interactions — did not predict the fitness effects of transferred genes. In contrast, dosage sensitivity, gene length, and the intrinsic protein disorder significantly impact the likelihood of a successful horizontal transfer. CONCLUSION: While computational approaches have been successful in describing long-term barriers to horizontal gene transfer, our experimental results identified previously underappreciated barriers that determine the fitness effects of newly transferred genes, and hence their short-term eco-evolutionary dynamics. BioMed Central 2020-10-28 /pmc/articles/PMC7592521/ /pubmed/33115402 http://dx.doi.org/10.1186/s12866-020-01983-5 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Acar Kirit, Hande
Lagator, Mato
Bollback, Jonathan P.
Experimental determination of evolutionary barriers to horizontal gene transfer
title Experimental determination of evolutionary barriers to horizontal gene transfer
title_full Experimental determination of evolutionary barriers to horizontal gene transfer
title_fullStr Experimental determination of evolutionary barriers to horizontal gene transfer
title_full_unstemmed Experimental determination of evolutionary barriers to horizontal gene transfer
title_short Experimental determination of evolutionary barriers to horizontal gene transfer
title_sort experimental determination of evolutionary barriers to horizontal gene transfer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7592521/
https://www.ncbi.nlm.nih.gov/pubmed/33115402
http://dx.doi.org/10.1186/s12866-020-01983-5
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