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Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches
BACKGROUND: The novel coronavirus disease 2019 (COVID-19) constitutes a public health emergency globally. The number of infected people and deaths are proliferating every day, which is putting tremendous pressure on our social and healthcare system. Rapid detection of COVID-19 cases is a significant...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
IOS Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7592691/ https://www.ncbi.nlm.nih.gov/pubmed/32773400 http://dx.doi.org/10.3233/XST-200715 |
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author | Rahaman, Md Mamunur Li, Chen Yao, Yudong Kulwa, Frank Rahman, Mohammad Asadur Wang, Qian Qi, Shouliang Kong, Fanjie Zhu, Xuemin Zhao, Xin |
author_facet | Rahaman, Md Mamunur Li, Chen Yao, Yudong Kulwa, Frank Rahman, Mohammad Asadur Wang, Qian Qi, Shouliang Kong, Fanjie Zhu, Xuemin Zhao, Xin |
author_sort | Rahaman, Md Mamunur |
collection | PubMed |
description | BACKGROUND: The novel coronavirus disease 2019 (COVID-19) constitutes a public health emergency globally. The number of infected people and deaths are proliferating every day, which is putting tremendous pressure on our social and healthcare system. Rapid detection of COVID-19 cases is a significant step to fight against this virus as well as release pressure off the healthcare system. OBJECTIVE: One of the critical factors behind the rapid spread of COVID-19 pandemic is a lengthy clinical testing time. The imaging tool, such as Chest X-ray (CXR), can speed up the identification process. Therefore, our objective is to develop an automated CAD system for the detection of COVID-19 samples from healthy and pneumonia cases using CXR images. METHODS: Due to the scarcity of the COVID-19 benchmark dataset, we have employed deep transfer learning techniques, where we examined 15 different pre-trained CNN models to find the most suitable one for this task. RESULTS: A total of 860 images (260 COVID-19 cases, 300 healthy and 300 pneumonia cases) have been employed to investigate the performance of the proposed algorithm, where 70% images of each class are accepted for training, 15% is used for validation, and rest is for testing. It is observed that the VGG19 obtains the highest classification accuracy of 89.3% with an average precision, recall, and F1 score of 0.90, 0.89, 0.90, respectively. CONCLUSION: This study demonstrates the effectiveness of deep transfer learning techniques for the identification of COVID-19 cases using CXR images. |
format | Online Article Text |
id | pubmed-7592691 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | IOS Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-75926912020-10-30 Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches Rahaman, Md Mamunur Li, Chen Yao, Yudong Kulwa, Frank Rahman, Mohammad Asadur Wang, Qian Qi, Shouliang Kong, Fanjie Zhu, Xuemin Zhao, Xin J Xray Sci Technol Research Article BACKGROUND: The novel coronavirus disease 2019 (COVID-19) constitutes a public health emergency globally. The number of infected people and deaths are proliferating every day, which is putting tremendous pressure on our social and healthcare system. Rapid detection of COVID-19 cases is a significant step to fight against this virus as well as release pressure off the healthcare system. OBJECTIVE: One of the critical factors behind the rapid spread of COVID-19 pandemic is a lengthy clinical testing time. The imaging tool, such as Chest X-ray (CXR), can speed up the identification process. Therefore, our objective is to develop an automated CAD system for the detection of COVID-19 samples from healthy and pneumonia cases using CXR images. METHODS: Due to the scarcity of the COVID-19 benchmark dataset, we have employed deep transfer learning techniques, where we examined 15 different pre-trained CNN models to find the most suitable one for this task. RESULTS: A total of 860 images (260 COVID-19 cases, 300 healthy and 300 pneumonia cases) have been employed to investigate the performance of the proposed algorithm, where 70% images of each class are accepted for training, 15% is used for validation, and rest is for testing. It is observed that the VGG19 obtains the highest classification accuracy of 89.3% with an average precision, recall, and F1 score of 0.90, 0.89, 0.90, respectively. CONCLUSION: This study demonstrates the effectiveness of deep transfer learning techniques for the identification of COVID-19 cases using CXR images. IOS Press 2020-09-19 /pmc/articles/PMC7592691/ /pubmed/32773400 http://dx.doi.org/10.3233/XST-200715 Text en © 2020 – IOS Press and the authors. All rights reserved https://creativecommons.org/licenses/by-nc/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Rahaman, Md Mamunur Li, Chen Yao, Yudong Kulwa, Frank Rahman, Mohammad Asadur Wang, Qian Qi, Shouliang Kong, Fanjie Zhu, Xuemin Zhao, Xin Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches |
title | Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches |
title_full | Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches |
title_fullStr | Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches |
title_full_unstemmed | Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches |
title_short | Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches |
title_sort | identification of covid-19 samples from chest x-ray images using deep learning: a comparison of transfer learning approaches |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7592691/ https://www.ncbi.nlm.nih.gov/pubmed/32773400 http://dx.doi.org/10.3233/XST-200715 |
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