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Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches

BACKGROUND: The novel coronavirus disease 2019 (COVID-19) constitutes a public health emergency globally. The number of infected people and deaths are proliferating every day, which is putting tremendous pressure on our social and healthcare system. Rapid detection of COVID-19 cases is a significant...

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Autores principales: Rahaman, Md Mamunur, Li, Chen, Yao, Yudong, Kulwa, Frank, Rahman, Mohammad Asadur, Wang, Qian, Qi, Shouliang, Kong, Fanjie, Zhu, Xuemin, Zhao, Xin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7592691/
https://www.ncbi.nlm.nih.gov/pubmed/32773400
http://dx.doi.org/10.3233/XST-200715
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author Rahaman, Md Mamunur
Li, Chen
Yao, Yudong
Kulwa, Frank
Rahman, Mohammad Asadur
Wang, Qian
Qi, Shouliang
Kong, Fanjie
Zhu, Xuemin
Zhao, Xin
author_facet Rahaman, Md Mamunur
Li, Chen
Yao, Yudong
Kulwa, Frank
Rahman, Mohammad Asadur
Wang, Qian
Qi, Shouliang
Kong, Fanjie
Zhu, Xuemin
Zhao, Xin
author_sort Rahaman, Md Mamunur
collection PubMed
description BACKGROUND: The novel coronavirus disease 2019 (COVID-19) constitutes a public health emergency globally. The number of infected people and deaths are proliferating every day, which is putting tremendous pressure on our social and healthcare system. Rapid detection of COVID-19 cases is a significant step to fight against this virus as well as release pressure off the healthcare system. OBJECTIVE: One of the critical factors behind the rapid spread of COVID-19 pandemic is a lengthy clinical testing time. The imaging tool, such as Chest X-ray (CXR), can speed up the identification process. Therefore, our objective is to develop an automated CAD system for the detection of COVID-19 samples from healthy and pneumonia cases using CXR images. METHODS: Due to the scarcity of the COVID-19 benchmark dataset, we have employed deep transfer learning techniques, where we examined 15 different pre-trained CNN models to find the most suitable one for this task. RESULTS: A total of 860 images (260 COVID-19 cases, 300 healthy and 300 pneumonia cases) have been employed to investigate the performance of the proposed algorithm, where 70% images of each class are accepted for training, 15% is used for validation, and rest is for testing. It is observed that the VGG19 obtains the highest classification accuracy of 89.3% with an average precision, recall, and F1 score of 0.90, 0.89, 0.90, respectively. CONCLUSION: This study demonstrates the effectiveness of deep transfer learning techniques for the identification of COVID-19 cases using CXR images.
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spelling pubmed-75926912020-10-30 Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches Rahaman, Md Mamunur Li, Chen Yao, Yudong Kulwa, Frank Rahman, Mohammad Asadur Wang, Qian Qi, Shouliang Kong, Fanjie Zhu, Xuemin Zhao, Xin J Xray Sci Technol Research Article BACKGROUND: The novel coronavirus disease 2019 (COVID-19) constitutes a public health emergency globally. The number of infected people and deaths are proliferating every day, which is putting tremendous pressure on our social and healthcare system. Rapid detection of COVID-19 cases is a significant step to fight against this virus as well as release pressure off the healthcare system. OBJECTIVE: One of the critical factors behind the rapid spread of COVID-19 pandemic is a lengthy clinical testing time. The imaging tool, such as Chest X-ray (CXR), can speed up the identification process. Therefore, our objective is to develop an automated CAD system for the detection of COVID-19 samples from healthy and pneumonia cases using CXR images. METHODS: Due to the scarcity of the COVID-19 benchmark dataset, we have employed deep transfer learning techniques, where we examined 15 different pre-trained CNN models to find the most suitable one for this task. RESULTS: A total of 860 images (260 COVID-19 cases, 300 healthy and 300 pneumonia cases) have been employed to investigate the performance of the proposed algorithm, where 70% images of each class are accepted for training, 15% is used for validation, and rest is for testing. It is observed that the VGG19 obtains the highest classification accuracy of 89.3% with an average precision, recall, and F1 score of 0.90, 0.89, 0.90, respectively. CONCLUSION: This study demonstrates the effectiveness of deep transfer learning techniques for the identification of COVID-19 cases using CXR images. IOS Press 2020-09-19 /pmc/articles/PMC7592691/ /pubmed/32773400 http://dx.doi.org/10.3233/XST-200715 Text en © 2020 – IOS Press and the authors. All rights reserved https://creativecommons.org/licenses/by-nc/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Rahaman, Md Mamunur
Li, Chen
Yao, Yudong
Kulwa, Frank
Rahman, Mohammad Asadur
Wang, Qian
Qi, Shouliang
Kong, Fanjie
Zhu, Xuemin
Zhao, Xin
Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches
title Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches
title_full Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches
title_fullStr Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches
title_full_unstemmed Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches
title_short Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches
title_sort identification of covid-19 samples from chest x-ray images using deep learning: a comparison of transfer learning approaches
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7592691/
https://www.ncbi.nlm.nih.gov/pubmed/32773400
http://dx.doi.org/10.3233/XST-200715
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