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ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to SARS-COV-2 in Cancer Patients
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused a global pandemic. One open question is whether genetics could influence the severity of symptoms. Considering the limited data on cancer patients, we analyzed public data repositories limited to investigate angiotensin-converti...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7593730/ https://www.ncbi.nlm.nih.gov/pubmed/33108902 http://dx.doi.org/10.1177/0963689720968749 |
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author | Ravaioli, Sara Tebaldi, Michela Fonzi, Eugenio Angeli, Davide Mazza, Massimiliano Nicolini, Fabio Lucchesi, Alessandro Fanini, Francesca Pirini, Francesca Tumedei, Maria Maddalena Cerchione, Claudio Viale, Pierluigi Sambri, Vittorio Martinelli, Giovanni Bravaccini, Sara |
author_facet | Ravaioli, Sara Tebaldi, Michela Fonzi, Eugenio Angeli, Davide Mazza, Massimiliano Nicolini, Fabio Lucchesi, Alessandro Fanini, Francesca Pirini, Francesca Tumedei, Maria Maddalena Cerchione, Claudio Viale, Pierluigi Sambri, Vittorio Martinelli, Giovanni Bravaccini, Sara |
author_sort | Ravaioli, Sara |
collection | PubMed |
description | Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused a global pandemic. One open question is whether genetics could influence the severity of symptoms. Considering the limited data on cancer patients, we analyzed public data repositories limited to investigate angiotensin-converting enzyme 2 (ACE2) and the transmembrane serine protease 2 (TMPRSS2) expressions and genetic variants to identify the basis of individual susceptibility to SARS-CoV-2. Gene expression and variant data were retrieved from Tissue Cancer Genome Atlas, Genotype-Tissue Expression, and gnomAD. Differences in gene expression were tested with Mann-Whitney U-test. Allele frequencies of germline variants were explored in different ethnicities, with a special focus on ACE2 variants located in the binding site to SARS-CoV-2 spike protein. The analysis of ACE2 and TMPRSS2 expressions in healthy tissues showed a higher expression in the age class 20 to 59 years (false discovery rate [FDR] < 0.0001) regardless of gender. ACE2 and TMPRSS2 were more expressed in tumors from males than females (both FDR < 0.0001) and, opposite to the regulation in tissues from healthy individuals, more expressed in elderly patients (FDR = 0.005; FDR < 0.0001, respectively). ACE2 and TMPRSS2 expressions were higher in cancers of elderly patients compared with healthy individuals (FDR < 0.0001). Variants were present at low frequency (range 0% to 3%) and among those with the highest frequency, the variant S19P belongs to the SARS-CoV-2 spike protein binding site and it was exclusively present in Africans with a frequency of 0.2%. The mechanisms of ACE2 and TMPRSS2 regulation could be targeted for preventive and therapeutic purposes in the whole population and especially in cancer patients. Further studies are needed to show a direct correlation of ACE2 and TMPRSS2 expressions in cancer patients and the incidence of COVID-19. |
format | Online Article Text |
id | pubmed-7593730 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-75937302020-11-02 ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to SARS-COV-2 in Cancer Patients Ravaioli, Sara Tebaldi, Michela Fonzi, Eugenio Angeli, Davide Mazza, Massimiliano Nicolini, Fabio Lucchesi, Alessandro Fanini, Francesca Pirini, Francesca Tumedei, Maria Maddalena Cerchione, Claudio Viale, Pierluigi Sambri, Vittorio Martinelli, Giovanni Bravaccini, Sara Cell Transplant Special Collection on Cell Transplantation and COVID-19 Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused a global pandemic. One open question is whether genetics could influence the severity of symptoms. Considering the limited data on cancer patients, we analyzed public data repositories limited to investigate angiotensin-converting enzyme 2 (ACE2) and the transmembrane serine protease 2 (TMPRSS2) expressions and genetic variants to identify the basis of individual susceptibility to SARS-CoV-2. Gene expression and variant data were retrieved from Tissue Cancer Genome Atlas, Genotype-Tissue Expression, and gnomAD. Differences in gene expression were tested with Mann-Whitney U-test. Allele frequencies of germline variants were explored in different ethnicities, with a special focus on ACE2 variants located in the binding site to SARS-CoV-2 spike protein. The analysis of ACE2 and TMPRSS2 expressions in healthy tissues showed a higher expression in the age class 20 to 59 years (false discovery rate [FDR] < 0.0001) regardless of gender. ACE2 and TMPRSS2 were more expressed in tumors from males than females (both FDR < 0.0001) and, opposite to the regulation in tissues from healthy individuals, more expressed in elderly patients (FDR = 0.005; FDR < 0.0001, respectively). ACE2 and TMPRSS2 expressions were higher in cancers of elderly patients compared with healthy individuals (FDR < 0.0001). Variants were present at low frequency (range 0% to 3%) and among those with the highest frequency, the variant S19P belongs to the SARS-CoV-2 spike protein binding site and it was exclusively present in Africans with a frequency of 0.2%. The mechanisms of ACE2 and TMPRSS2 regulation could be targeted for preventive and therapeutic purposes in the whole population and especially in cancer patients. Further studies are needed to show a direct correlation of ACE2 and TMPRSS2 expressions in cancer patients and the incidence of COVID-19. SAGE Publications 2020-10-27 /pmc/articles/PMC7593730/ /pubmed/33108902 http://dx.doi.org/10.1177/0963689720968749 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Special Collection on Cell Transplantation and COVID-19 Ravaioli, Sara Tebaldi, Michela Fonzi, Eugenio Angeli, Davide Mazza, Massimiliano Nicolini, Fabio Lucchesi, Alessandro Fanini, Francesca Pirini, Francesca Tumedei, Maria Maddalena Cerchione, Claudio Viale, Pierluigi Sambri, Vittorio Martinelli, Giovanni Bravaccini, Sara ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to SARS-COV-2 in Cancer Patients |
title | ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to
SARS-COV-2 in Cancer Patients |
title_full | ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to
SARS-COV-2 in Cancer Patients |
title_fullStr | ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to
SARS-COV-2 in Cancer Patients |
title_full_unstemmed | ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to
SARS-COV-2 in Cancer Patients |
title_short | ACE2 and TMPRSS2 Potential Involvement in Genetic Susceptibility to
SARS-COV-2 in Cancer Patients |
title_sort | ace2 and tmprss2 potential involvement in genetic susceptibility to
sars-cov-2 in cancer patients |
topic | Special Collection on Cell Transplantation and COVID-19 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7593730/ https://www.ncbi.nlm.nih.gov/pubmed/33108902 http://dx.doi.org/10.1177/0963689720968749 |
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