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Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma
BACKGROUND: Deciphering the immune characteristics within tumors and identifying the immune signals related to the prognostic factor are helpful for the treatment and management of tumor patients. However, systematic analysis of immune signatures in head and neck squamous cell carcinoma (HNSCC) rema...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7593737/ https://www.ncbi.nlm.nih.gov/pubmed/33134377 http://dx.doi.org/10.1155/2020/4725314 |
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author | Wang, Yingying Xu, Yu Hua, Qingquan Jiang, Yang Liu, Peiqiang Zhang, Wei Xiang, Rong |
author_facet | Wang, Yingying Xu, Yu Hua, Qingquan Jiang, Yang Liu, Peiqiang Zhang, Wei Xiang, Rong |
author_sort | Wang, Yingying |
collection | PubMed |
description | BACKGROUND: Deciphering the immune characteristics within tumors and identifying the immune signals related to the prognostic factor are helpful for the treatment and management of tumor patients. However, systematic analysis of immune signatures in head and neck squamous cell carcinoma (HNSCC) remains largely unstudied. METHODS: A total of 718 immune-related genes were extracted from RNA sequencing data from 519 HNSCC patients in the TCGA database, and survival analysis with integrated bioinformatics analyses was performed to build the final predictive prognosis model. RESULTS: The 178 survival-associated genes (P < 0.05) participated in important immune functions, including immune cell activation and migration. Multivariate regression analysis using 93 genes (P < 0.01), together with survival-associated clinicopathological parameters, identified 35 independent prognostic factors. The most significant 8 independent factors were CD3E, CD40LG, TNFRSF4, CD3G, CD5, ITGA2B, ABCB1, and TNFRSF13b. The final prognostic model achieved outstanding predictive efficiency with the highest AUC of 0.963. CONCLUSION: Our prognostic model based on the immune signature could effectively predict the prognosis of HNSCC patients, providing novel predictive biomarkers and potential therapeutic targets for HNSCC patients. |
format | Online Article Text |
id | pubmed-7593737 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-75937372020-10-30 Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma Wang, Yingying Xu, Yu Hua, Qingquan Jiang, Yang Liu, Peiqiang Zhang, Wei Xiang, Rong Biomed Res Int Research Article BACKGROUND: Deciphering the immune characteristics within tumors and identifying the immune signals related to the prognostic factor are helpful for the treatment and management of tumor patients. However, systematic analysis of immune signatures in head and neck squamous cell carcinoma (HNSCC) remains largely unstudied. METHODS: A total of 718 immune-related genes were extracted from RNA sequencing data from 519 HNSCC patients in the TCGA database, and survival analysis with integrated bioinformatics analyses was performed to build the final predictive prognosis model. RESULTS: The 178 survival-associated genes (P < 0.05) participated in important immune functions, including immune cell activation and migration. Multivariate regression analysis using 93 genes (P < 0.01), together with survival-associated clinicopathological parameters, identified 35 independent prognostic factors. The most significant 8 independent factors were CD3E, CD40LG, TNFRSF4, CD3G, CD5, ITGA2B, ABCB1, and TNFRSF13b. The final prognostic model achieved outstanding predictive efficiency with the highest AUC of 0.963. CONCLUSION: Our prognostic model based on the immune signature could effectively predict the prognosis of HNSCC patients, providing novel predictive biomarkers and potential therapeutic targets for HNSCC patients. Hindawi 2020-10-19 /pmc/articles/PMC7593737/ /pubmed/33134377 http://dx.doi.org/10.1155/2020/4725314 Text en Copyright © 2020 Yingying Wang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Wang, Yingying Xu, Yu Hua, Qingquan Jiang, Yang Liu, Peiqiang Zhang, Wei Xiang, Rong Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma |
title | Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma |
title_full | Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma |
title_fullStr | Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma |
title_full_unstemmed | Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma |
title_short | Novel Prognostic Model Based on Immune Signature for Head and Neck Squamous Cell Carcinoma |
title_sort | novel prognostic model based on immune signature for head and neck squamous cell carcinoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7593737/ https://www.ncbi.nlm.nih.gov/pubmed/33134377 http://dx.doi.org/10.1155/2020/4725314 |
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